Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU149795 |
| length | 1389 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G119507 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 25234082 ~ 25267781 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00680 | Methane metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU149704 | lncRNA | upstream | 383032 | 24850836 ~ 24851050 (+) | True | G119429 |
| TU149685 | lncRNA | upstream | 398373 | 24799950 ~ 24835709 (+) | True | G119416 |
| TU149688 | lncRNA | upstream | 424263 | 24807747 ~ 24809819 (+) | True | G119419 |
| TU149585 | lncRNA | upstream | 635068 | 24537666 ~ 24599014 (+) | True | G119354 |
| TU149590 | lncRNA | upstream | 665098 | 24565712 ~ 24568984 (+) | True | G119359 |
| TU149814 | lncRNA | downstream | 35405 | 25303186 ~ 25313495 (+) | True | G119523 |
| TU149822 | lncRNA | downstream | 63609 | 25331390 ~ 25338189 (+) | True | G119529 |
| TU149876 | lncRNA | downstream | 218064 | 25485845 ~ 25488149 (+) | True | G119574 |
| TU149934 | lncRNA | downstream | 447152 | 25714933 ~ 25718248 (+) | False | AMCG00018922 |
| TU149981 | lncRNA | downstream | 771498 | 26039279 ~ 26078413 (+) | True | G119669 |
| AMCG00018901 | mRNA | upstream | 20927 | 25203672 ~ 25213155 (+) | True | AMCG00018901 |
| AMCG00018902 | mRNA | upstream | 45240 | 25171485 ~ 25188842 (+) | True | AMCG00018902 |
| AMCG00018908 | mRNA | upstream | 89284 | 25136587 ~ 25144798 (+) | True | AMCG00018908 |
| AMCG00018897 | mRNA | upstream | 116663 | 25091131 ~ 25117419 (+) | True | AMCG00018897 |
| AMCG00018899 | mRNA | upstream | 143797 | 25084176 ~ 25090285 (+) | True | AMCG00018899 |
| AMCG00018909 | mRNA | downstream | 19627 | 25287408 ~ 25294157 (+) | True | AMCG00018909 |
| AMCG00018913 | mRNA | downstream | 198310 | 25466091 ~ 25484837 (+) | True | AMCG00018913 |
| AMCG00018915 | mRNA | downstream | 266322 | 25534103 ~ 25544880 (+) | True | AMCG00018915 |
| AMCG00018914 | mRNA | downstream | 287675 | 25555456 ~ 25582394 (+) | True | AMCG00018914 |
| AMCG00018918 | mRNA | downstream | 316535 | 25584316 ~ 25592691 (+) | True | AMCG00018918 |
| TU148883 | other | upstream | 4044836 | 21187956 ~ 21189246 (+) | True | G118815 |
| TU148789 | other | upstream | 4477862 | 20755629 ~ 20756220 (+) | False | AMCG00018802 |
| TU148663 | other | upstream | 4630767 | 20601956 ~ 20603315 (+) | True | AMCG00018792 |
| TU148657 | other | upstream | 4639943 | 20593366 ~ 20594139 (+) | True | G118636 |
| TU148656 | other | upstream | 4641066 | 20592736 ~ 20593016 (+) | True | G118635 |
| TU149874 | other | downstream | 216516 | 25484297 ~ 25485446 (+) | False | AMCG00018913 |
| TU150090 | other | downstream | 1192839 | 26460620 ~ 26461227 (+) | True | G119762 |
