RNA id: TU149840



Basic Information


Item Value
RNA id TU149840
length 306
RNA type TUCP
GC content 0.57
exon number 2
gene id G119545
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25186207 ~ 25187408 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTGAACAGGAGGCTCTAGTGCTTGGATATGGAGGAGAAAGTGGAAGAGACTTACAGGCAGCGGCTCCACGTAGAGGATAAGGAAGTGCAGCGACATGGACAGGCAGATGGCGCCCAGCAGCCAGACGTTCTCCCAGGGGGGCATCCTGAGCAGAGACTGGTTCTCCGACAGGCTGTGAGAGCGTTGCACATCTCGATGGTGACCAGCACGGACAGGGCCATGGTCATGGGATACGGGGATTCAAACACCTCACATTCAAGGTCTTGGAAGTCTGGATTGTCAGGTCCACACTGCAGGAAGTGGCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149749 lncRNA downstream 140863 25044951 ~ 25045344 (-) True G119466
TU149701 lncRNA downstream 344086 24836787 ~ 24842121 (-) True G119426
TU149635 lncRNA downstream 577745 24519413 ~ 24608462 (-) True G119382
TU149638 lncRNA downstream 617908 24566146 ~ 24568299 (-) True G119384
TU149444 lncRNA downstream 2074687 23109601 ~ 23111520 (-) True G119235
TU149859 lncRNA upstream 74954 25262362 ~ 25333175 (-) True G119557
TU149903 lncRNA upstream 291602 25479010 ~ 25479524 (-) True G119600
TU149919 lncRNA upstream 384646 25572054 ~ 25578122 (-) True G119615
TU149942 lncRNA upstream 403164 25590572 ~ 25656954 (-) True G119632
TU149947 lncRNA upstream 417623 25605031 ~ 25606144 (-) True G119637
AMCG00018898 mRNA downstream 101621 25075398 ~ 25084586 (-) True AMCG00018898
AMCG00018896 mRNA downstream 113091 25071542 ~ 25073116 (-) True AMCG00018896
AMCG00018895 mRNA downstream 178265 24961078 ~ 25007942 (-) True AMCG00018895
AMCG00018894 mRNA downstream 251255 24889631 ~ 24934952 (-) True AMCG00018894
AMCG00018892 mRNA downstream 309400 24856214 ~ 24876807 (-) True AMCG00018892
AMCG00018904 mRNA upstream 5756 25193164 ~ 25203675 (-) True AMCG00018904
AMCG00018903 mRNA upstream 26231 25213639 ~ 25217823 (-) True AMCG00018903
AMCG00018906 mRNA upstream 32696 25220104 ~ 25225859 (-) True AMCG00018906
AMCG00018905 mRNA upstream 51489 25238897 ~ 25244280 (-) True AMCG00018905
AMCG00018907 mRNA upstream 79340 25266748 ~ 25285927 (-) True AMCG00018907
TU149831 other downstream 14563 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 108627 25075398 ~ 25077580 (-) False AMCG00018898
TU149337 other downstream 2379869 22804345 ~ 22806338 (-) True G119144
TU149076 other downstream 3072512 22080464 ~ 22113695 (-) True G118936
TU148773 other downstream 4488380 20696834 ~ 20697827 (-) False G118727
TU150163 other upstream 1626072 26813480 ~ 26814073 (-) True G119827
TU150237 other upstream 2043465 27230873 ~ 27242574 (-) True G119893

Expression Profile