RNA id: TU149966



Basic Information


Item Value
RNA id TU149966
length 391
lncRNA type inter_gene
GC content 0.24
exon number 1
gene id G119655
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25718586 ~ 25718976 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCCCTTTTATTTgaatgatatttatatatatatatttatatatatgtattaaaaaaagccCACAGCAAAAAATGCTTCATAGGAAtcacattaaaagaaaacaaaaaacaaatcaaaccagcATCAAATGTACAGCTTTCATaatttcaaaaaaattaaaaaaaaaataataataataaaaacaatcagctgaaatttgaatatatacagGCATGCTAAGAATTATACAAATAACAGTGAAGAAAATAGCTGAATAAACAGGGGGTTACAGTCTGTTTATGTCCTTTTTAAACcaccattaaaataatgcatattaattaaatataccaTACAATTTTCATAATGctcaaatacataatttgtttgAATCTATTGCCATTTAGTTCAAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149942 lncRNA downstream 61632 25590572 ~ 25656954 (-) True G119632
TU149947 lncRNA downstream 112442 25605031 ~ 25606144 (-) True G119637
TU149919 lncRNA downstream 140464 25572054 ~ 25578122 (-) True G119615
TU149903 lncRNA downstream 239062 25479010 ~ 25479524 (-) True G119600
TU149859 lncRNA downstream 385411 25262362 ~ 25333175 (-) True G119557
TU149986 lncRNA upstream 301251 26020227 ~ 26068649 (-) True G119672
TU149987 lncRNA upstream 357682 26076658 ~ 26078404 (-) True G119673
TU150001 lncRNA upstream 393888 26112864 ~ 26113153 (-) True G119685
TU150009 lncRNA upstream 400446 26119422 ~ 26151071 (-) True G119691
TU150034 lncRNA upstream 601001 26319977 ~ 26343078 (-) True G119713
AMCG00018920 mRNA downstream 117923 25596536 ~ 25600663 (-) True AMCG00018920
AMCG00018917 mRNA downstream 165494 25547542 ~ 25553092 (-) True AMCG00018917
AMCG00018916 mRNA downstream 185230 25489444 ~ 25533356 (-) True AMCG00018916
AMCG00018910 mRNA downstream 380533 25331301 ~ 25338053 (-) True AMCG00018910
AMCG00018911 mRNA downstream 403374 25303537 ~ 25315212 (-) True AMCG00018911
AMCG00018925 mRNA upstream 625654 26344630 ~ 26356608 (-) True AMCG00018925
AMCG00018926 mRNA upstream 648374 26367350 ~ 26410785 (-) True AMCG00018926
AMCG00018929 mRNA upstream 732748 26451724 ~ 26485315 (-) True AMCG00018929
AMCG00018928 mRNA upstream 904848 26623824 ~ 26625548 (-) True AMCG00018928
AMCG00018931 mRNA upstream 1014291 26733267 ~ 26771289 (-) True AMCG00018931
TU149840 other downstream 531178 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 546942 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 641006 25075398 ~ 25077580 (-) False AMCG00018898
TU149337 other downstream 2912248 22804345 ~ 22806338 (-) True G119144
TU149076 other downstream 3604891 22080464 ~ 22113695 (-) True G118936
TU150163 other upstream 1094504 26813480 ~ 26814073 (-) True G119827
TU150237 other upstream 1511897 27230873 ~ 27242574 (-) True G119893

Expression Profile