RNA id: TU150103


Basic Information

Item Value
RNA id TU150103
length 209
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G119774
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26501001 ~ 26501920 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCTTACTCTGTTGAGACACAGACGGATGAGGAAGATGAGGTGGAAGTGGAGTATAACCAGGAAGCCTTCACAGAGTGGAGCTCAAGCACACCTGCAAAGCGGAATGTAAAAATGACCAGGAATAAAGCTATCCAGCAGTCCCACAAGcTCTCCTTTCTCTGGCTGGACGAGATTAACTCAGACAGACTGCTACTACAGGAGTCCCTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150098 lncRNA downstream 39841 26460618 ~ 26461160 (-) True G119770
TU150088 lncRNA downstream 43176 26457381 ~ 26457825 (-) False AMCG00018929
TU150034 lncRNA downstream 157923 26319977 ~ 26343078 (-) True G119713
TU150009 lncRNA downstream 349930 26119422 ~ 26151071 (-) True G119691
TU150001 lncRNA downstream 387848 26112864 ~ 26113153 (-) True G119685
TU150156 lncRNA upstream 275715 26777635 ~ 26779240 (-) False AMCG00018930
TU150157 lncRNA upstream 275715 26777635 ~ 26778640 (-) False AMCG00018930
TU150161 lncRNA upstream 308964 26810884 ~ 26812556 (-) True G119825
TU150162 lncRNA upstream 311194 26813114 ~ 26813426 (-) True G119826
TU150235 lncRNA upstream 720586 27222506 ~ 27278009 (-) True G119891
AMCG00018929 mRNA downstream 15686 26451724 ~ 26485315 (-) True AMCG00018929
AMCG00018926 mRNA downstream 90216 26367350 ~ 26410785 (-) True AMCG00018926
AMCG00018925 mRNA downstream 144393 26344630 ~ 26356608 (-) True AMCG00018925
AMCG00018920 mRNA downstream 900338 25596536 ~ 25600663 (-) True AMCG00018920
AMCG00018917 mRNA downstream 947909 25547542 ~ 25553092 (-) True AMCG00018917
AMCG00018928 mRNA upstream 121904 26623824 ~ 26625548 (-) True AMCG00018928
AMCG00018931 mRNA upstream 231347 26733267 ~ 26771289 (-) True AMCG00018931
AMCG00018930 mRNA upstream 275819 26777739 ~ 26797720 (-) True AMCG00018930
AMCG00018933 mRNA upstream 323342 26825262 ~ 26825957 (-) True AMCG00018933
AMCG00018932 mRNA upstream 342850 26844770 ~ 26869193 (-) True AMCG00018932
TU149840 other downstream 1313593 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 1329357 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 1423421 25075398 ~ 25077580 (-) False AMCG00018898
TU149337 other downstream 3694663 22804345 ~ 22806338 (-) True G119144
TU149076 other downstream 4387306 22080464 ~ 22113695 (-) True G118936
TU150163 other upstream 311560 26813480 ~ 26814073 (-) True G119827
TU150237 other upstream 728953 27230873 ~ 27242574 (-) True G119893

Expression Profile