RNA id: TU150150


Basic Information

Item Value
RNA id TU150150
length 241
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G119816
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26775743 ~ 26776199 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTGTGGGAGAGCCTAGGGAAGGACAGTGAGCTGGAAGCAAAGAATCAACAGGGGGACTCTGCCTAAACAGCCCAGGTGCCGTGTCCACCCCACATGGTGTCAGAATATATACCACAGTCCTTGACCACCTACTAAagacatctgttcagactgtacctgcaATACACCAGCTTTATCTCCTGGGCTACTCGGCACTCTTTCTATTTTGCACTTCATTACATATCTTTCCTTATGCTACTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150116 lncRNA upstream 143026 26632502 ~ 26632717 (+) True G119786
TU150109 lncRNA upstream 212730 26562791 ~ 26563013 (+) True G119779
TU150076 lncRNA upstream 331683 26442193 ~ 26444060 (+) True G119750
TU150023 lncRNA upstream 499158 26276385 ~ 26276585 (+) True G119703
TU150000 lncRNA upstream 662612 26112872 ~ 26113131 (+) True G119684
TU150151 lncRNA downstream 1454 26777653 ~ 26778660 (+) True G119817
TU150155 lncRNA downstream 49016 26825215 ~ 26826592 (+) True G119820
TU150170 lncRNA downstream 68490 26844689 ~ 26849498 (+) True G119834
TU150172 lncRNA downstream 73427 26849626 ~ 26855442 (+) True G119836
TU150242 lncRNA downstream 504807 27281006 ~ 27281572 (+) True G119897
AMCG00018927 mRNA upstream 337430 26431716 ~ 26438313 (+) True AMCG00018927
AMCG00018924 mRNA upstream 582259 26153655 ~ 26193484 (+) True AMCG00018924
AMCG00018923 mRNA upstream 698481 26065643 ~ 26077262 (+) True AMCG00018923
AMCG00018922 mRNA upstream 1057317 25678677 ~ 25718426 (+) True AMCG00018922
AMCG00018921 mRNA upstream 1133275 25628737 ~ 25642468 (+) True AMCG00018921
AMCG00018934 mRNA downstream 96651 26872850 ~ 26875837 (+) True AMCG00018934
AMCG00018936 mRNA downstream 271567 27047766 ~ 27048707 (+) True AMCG00018936
AMCG00018935 mRNA downstream 272647 27048846 ~ 27049202 (+) True AMCG00018935
AMCG00018939 mRNA downstream 297597 27073796 ~ 27075433 (+) True AMCG00018939
AMCG00018942 mRNA downstream 425753 27201952 ~ 27202650 (+) True AMCG00018942
TU150090 other upstream 314516 26460620 ~ 26461227 (+) True G119762
TU149874 other upstream 1290297 25484297 ~ 25485446 (+) False AMCG00018913
TU149795 other upstream 1507962 25234082 ~ 25267781 (+) True G119507
TU148883 other upstream 5586497 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 6019523 20755629 ~ 20756220 (+) False AMCG00018802

Expression Profile