RNA id: TU150162



Basic Information


Item Value
RNA id TU150162
length 313
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G119826
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26813114 ~ 26813426 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tctgacTCCTGCCTTTTTCCTCTGCCAGTCTGctcctgttaagtgcatcctgggggagctagtgaaccgtgtttttccctttcatcggactatgccttccagtcggtaagagctgtagttgccctgcgctaGCTACGCTGTTCAGCAGGTGTCAACTTCTACTGTGTTTCCatgtgtggcgcatgagccggCTCCTAcgccccatggtgtatatagtttgtttgtacgaaatctaattgtcagcacaattgagctcttccactcttgctgtcacgcgatatgtatatattgtatgttcttgttcagctcggct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU150161 lncRNA downstream 558 26810884 ~ 26812556 (-) True G119825
TU150156 lncRNA downstream 33874 26777635 ~ 26779240 (-) False AMCG00018930
TU150157 lncRNA downstream 34474 26777635 ~ 26778640 (-) False AMCG00018930
TU150103 lncRNA downstream 311194 26501001 ~ 26501920 (-) True G119774
TU150098 lncRNA downstream 351954 26460618 ~ 26461160 (-) True G119770
TU150235 lncRNA upstream 409080 27222506 ~ 27278009 (-) True G119891
TU150257 lncRNA upstream 542399 27355825 ~ 27356032 (-) True G119912
TU150274 lncRNA upstream 651961 27465387 ~ 27468649 (-) True G119929
TU150289 lncRNA upstream 693082 27506508 ~ 27507199 (-) True G119944
TU150290 lncRNA upstream 705186 27518612 ~ 27519715 (-) True G119945
AMCG00018930 mRNA downstream 15394 26777739 ~ 26797720 (-) True AMCG00018930
AMCG00018931 mRNA downstream 41825 26733267 ~ 26771289 (-) True AMCG00018931
AMCG00018928 mRNA downstream 187566 26623824 ~ 26625548 (-) True AMCG00018928
AMCG00018929 mRNA downstream 327799 26451724 ~ 26485315 (-) True AMCG00018929
AMCG00018926 mRNA downstream 402329 26367350 ~ 26410785 (-) True AMCG00018926
AMCG00018933 mRNA upstream 11836 26825262 ~ 26825957 (-) True AMCG00018933
AMCG00018932 mRNA upstream 31344 26844770 ~ 26869193 (-) True AMCG00018932
AMCG00018938 mRNA upstream 59468 26872894 ~ 26943014 (-) True AMCG00018938
AMCG00018937 mRNA upstream 129638 26943064 ~ 27063981 (-) True AMCG00018937
AMCG00018940 mRNA upstream 403736 27217162 ~ 27224946 (-) True AMCG00018940
TU149840 other downstream 1625706 25186207 ~ 25187408 (-) True G119545
TU149831 other downstream 1641470 25134771 ~ 25171644 (-) True G119538
TU149755 other downstream 1735534 25075398 ~ 25077580 (-) False AMCG00018898
TU149337 other downstream 4006776 22804345 ~ 22806338 (-) True G119144
TU149076 other downstream 4699419 22080464 ~ 22113695 (-) True G118936
TU150163 other upstream 54 26813480 ~ 26814073 (-) True G119827
TU150237 other upstream 417447 27230873 ~ 27242574 (-) True G119893

Expression Profile