RNA id: TU150408


Basic Information

Item Value
RNA id TU150408
length 282
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G120029
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27914842 ~ 27915123 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATAGGAACTTTCTGATATAATTcttctaaaaactaaaaaaaaaaaaatcaatcaaaaaacaGTTCAACAGGGGGTACAACATTTGATTTCTGTTGGAAATATGGAGATCACTTACAAGCATTCTTGGTGGGATTTTGCTTTTATAGGTGCTACTTTCTTATCTGTGTTAATTGTTactatgtgtatgttttattaccTATATCCTCTAATATGTACTTATTATAGTGATGTTATCACCATTCGGCGTGAGACATTAGTTTCATGTAATAAGCTTGGTAAATC

Function

GO:

id name namespace
GO:0048518 positive regulation of biological process biological_process
GO:0048522 positive regulation of cellular process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150317 lncRNA upstream 244008 27670633 ~ 27670834 (+) True G119963
TU150285 lncRNA upstream 395092 27518264 ~ 27519750 (+) True G119940
TU150286 lncRNA upstream 399296 27514319 ~ 27515546 (+) True G119941
TU150242 lncRNA upstream 633270 27281006 ~ 27281572 (+) True G119897
TU150172 lncRNA upstream 1059400 26849626 ~ 26855442 (+) True G119836
TU150419 lncRNA downstream 34274 27949397 ~ 27951723 (+) True G120039
TU150464 lncRNA downstream 276801 28191924 ~ 28202170 (+) True G120078
TU150509 lncRNA downstream 387924 28303047 ~ 28304416 (+) True G120112
TU150559 lncRNA downstream 474781 28389904 ~ 28390171 (+) True G120155
TU150561 lncRNA downstream 480763 28395886 ~ 28396754 (+) True G120157
AMCG00018951 mRNA upstream 122981 27781627 ~ 27791861 (+) True AMCG00018951
AMCG00018950 mRNA upstream 172742 27741027 ~ 27742100 (+) True AMCG00018950
AMCG00018949 mRNA upstream 251860 27625837 ~ 27662982 (+) True AMCG00018949
AMCG00018945 mRNA upstream 334591 27568440 ~ 27580251 (+) True AMCG00018945
AMCG00018944 mRNA upstream 400911 27500360 ~ 27513931 (+) True AMCG00018944
AMCG00018957 mRNA downstream 309655 28224778 ~ 28235729 (+) True AMCG00018957
AMCG00018963 mRNA downstream 349889 28265012 ~ 28299406 (+) True AMCG00018963
AMCG00018964 mRNA downstream 425380 28340503 ~ 28342812 (+) True AMCG00018964
AMCG00018965 mRNA downstream 439124 28354247 ~ 28369900 (+) True AMCG00018965
TU150090 other upstream 1453615 26460620 ~ 26461227 (+) True G119762
TU149874 other upstream 2429396 25484297 ~ 25485446 (+) False AMCG00018913
TU149795 other upstream 2647061 25234082 ~ 25267781 (+) True G119507
TU148883 other upstream 6725596 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 7158622 20755629 ~ 20756220 (+) False AMCG00018802

Expression Profile