RNA id: TU150559


Basic Information

Item Value
RNA id TU150559
length 268
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G120155
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 28389904 ~ 28390171 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTTGCTTGATTTTTATAGAGTATGTTATAAATACCATTCTTATGAAGCCTGACAAATTGTATGctgtaatattgaatattttcaaagttacagcatttgtttgtttttcctatcatgttacaaatgttccctATGTGAAAGATGCATTATATCTTAATAACATCTAAACAATTAAAGatatacagattattattttcgGTAAAGTTATAACACATTGCTATTAACTATGTGTGTcagtaaaagtttaaaaaatccTAACAGTTTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150509 lncRNA upstream 85488 28303047 ~ 28304416 (+) True G120112
TU150464 lncRNA upstream 187734 28191924 ~ 28202170 (+) True G120078
TU150419 lncRNA upstream 438181 27949397 ~ 27951723 (+) True G120039
TU150408 lncRNA upstream 474781 27914842 ~ 27915123 (+) True G120029
TU150317 lncRNA upstream 719070 27670633 ~ 27670834 (+) True G119963
TU150561 lncRNA downstream 5715 28395886 ~ 28396754 (+) True G120157
AMCG00018965 mRNA upstream 20004 28354247 ~ 28369900 (+) True AMCG00018965
AMCG00018964 mRNA upstream 47092 28340503 ~ 28342812 (+) True AMCG00018964
AMCG00018963 mRNA upstream 90498 28265012 ~ 28299406 (+) True AMCG00018963
AMCG00018957 mRNA upstream 154175 28224778 ~ 28235729 (+) True AMCG00018957
AMCG00018951 mRNA upstream 598043 27781627 ~ 27791861 (+) True AMCG00018951
TU150090 other upstream 1928677 26460620 ~ 26461227 (+) True G119762
TU149874 other upstream 2904458 25484297 ~ 25485446 (+) False AMCG00018913
TU149795 other upstream 3122123 25234082 ~ 25267781 (+) True G119507
TU148883 other upstream 7200658 21187956 ~ 21189246 (+) True G118815
TU148789 other upstream 7633684 20755629 ~ 20756220 (+) False AMCG00018802

Expression Profile