RNA id: AMCG00018978


Basic Information

Item Value
RNA id AMCG00018978
length 930
RNA type mRNA
GC content 0.68
exon number 6
gene id AMCG00018978
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 196318 ~ 200408 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGCTCCTTCCTACTGCTGCAGGCATTCGGGGCCCAGCTGCTGTGGGGCCTGGAGGGGCCCCTGGCCCTCATCACGCTGCAGCCCGGATTTGCACACAAGGTCCGAGGCCTGTGTGGCACCTTCACCCGGAGCCAGCAGGATGACTTCAGTACCCCCGAGGGCGACGTGGAGCCCAGCGCCCCGGCCTTTGCCGCCCGCTACAGCACCACCCCACACTGCCCCCCTCCACGGGCCCCCCCACTCGACCCCTGTGGTACCTACACTCAGAGACGACAACTGGCCGAGACCGCCTGCGCCGCCATACACAGCCCAGGCTTCCAGCCCTGCCATGACCTGGTGGAGAGGGAGCCGTTTCACCGGCTGTGTCTGTCCGAGGTGTGCGGCTGCAGCTCCCCCCGGCAGTGCCACTGTGCGGTCCTGGCCACCTACGCGCTCCACTGTGCCCAGGAGGGGGCGCCGGTCAGCTGGAGGAACCACAGCTACTGCCCGGCGCCGTGCAGCGGAGGCCAGGTGTACCAGGAGTGCGGGCGGCCGTGCCAGGGCTCGTGTGCTGAGCTGCGGGTGGCAGGGGGCTGCCGCGTGGGGCAGGTGTGTGTGCCTGGCTGTAACTGCCCCCCAGGGCTGGTGCTAGGCGAGGAGGGGCAGTGTGTGCCTGTCAGCCTGTGCCCCTGTGTGCAGGGAGATGGGCTGTACCAGCCGGGCAGCACTGTCCAGAACAACTGCAACACCTGtgtgtgtcagagtgggGTGTGGAACTGCACGGAGAACACCTGTCCTGATGTGGTGGTGTGCCCGGGCACGCTGGTGTTCTCCCCGCGGTCCTGCCTGCACACCTGCGACAGCCTGGACACCCCTGGGCGCTGCGCACAGACTCTGAGTGGCTGCGTCTGCGCCGAGGGCACCGTGCTACTGGTCAGTGCGTCGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38196 lncRNA downstream 27568 227976 ~ 282144 (+) True G30549
TU38203 lncRNA downstream 54918 255326 ~ 255697 (+) True G30554
TU38232 lncRNA downstream 170038 370446 ~ 371798 (+) True G30583
TU38301 lncRNA downstream 242760 443168 ~ 496520 (+) False G30619
TU38304 lncRNA downstream 292152 492560 ~ 496520 (+) True G30619
AMCG00018982 mRNA upstream 6602 185846 ~ 189716 (+) True AMCG00018982
AMCG00018977 mRNA downstream 402 200810 ~ 232866 (+) True AMCG00018977
AMCG00018979 mRNA downstream 32981 233389 ~ 234148 (+) True AMCG00018979
AMCG00018980 mRNA downstream 33779 234187 ~ 237244 (+) True AMCG00018980
AMCG00018981 mRNA downstream 36842 237250 ~ 245772 (+) True AMCG00018981
AMCG00018983 mRNA downstream 45690 246098 ~ 255447 (+) True AMCG00018983
TU38173 other upstream 122087 73792 ~ 74231 (+) True G30527
TU38241 other downstream 195093 395501 ~ 398672 (+) True G30589
TU38342 other downstream 354358 554766 ~ 556904 (+) False AMCG00018999
TU38402 other downstream 794919 995327 ~ 1001213 (+) True G30698
TU38636 other downstream 1033086 1233494 ~ 1237637 (+) True AMCG00019030
TU38640 other downstream 1052958 1253366 ~ 1253735 (+) True G30877

Expression Profile