RNA id: AMCG00018979


Basic Information

Item Value
RNA id AMCG00018979
length 210
RNA type mRNA
GC content 0.70
exon number 2
gene id AMCG00018979
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 233389 ~ 234148 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAGGGGCAGGCAGGCATCTGTGCTGGGCCGGAGCACTGTGTGCCAGGCTGCTACTGCCCCCAGgggCTGCTGCAGCAGAACGGCTCCTGTGTGCCGGCAGAGCAGTGTGGCTGTGTGCACCTCCTGCCCGCCCGGCCCAGCGCAGTGCCCATCGCGGTGCGTGTCCAGGAGGGCGCGCTGGTGAGGGACAGCTGCAGAGACTGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38203 lncRNA downstream 21178 255326 ~ 255697 (+) True G30554
TU38232 lncRNA downstream 136298 370446 ~ 371798 (+) True G30583
TU38301 lncRNA downstream 209020 443168 ~ 496520 (+) False G30619
TU38304 lncRNA downstream 258412 492560 ~ 496520 (+) True G30619
TU38302 lncRNA downstream 260172 494320 ~ 496520 (+) False G30619
AMCG00018977 mRNA upstream 523 200810 ~ 232866 (+) True AMCG00018977
AMCG00018978 mRNA upstream 32981 196318 ~ 200408 (+) True AMCG00018978
AMCG00018982 mRNA upstream 43673 185846 ~ 189716 (+) True AMCG00018982
AMCG00018980 mRNA downstream 39 234187 ~ 237244 (+) True AMCG00018980
AMCG00018981 mRNA downstream 3102 237250 ~ 245772 (+) True AMCG00018981
AMCG00018983 mRNA downstream 11950 246098 ~ 255447 (+) True AMCG00018983
AMCG00018984 mRNA downstream 21325 255473 ~ 259291 (+) True AMCG00018984
AMCG00018990 mRNA downstream 177335 411483 ~ 414872 (+) True AMCG00018990
TU38173 other upstream 159158 73792 ~ 74231 (+) True G30527
TU38241 other downstream 161353 395501 ~ 398672 (+) True G30589
TU38342 other downstream 320618 554766 ~ 556904 (+) False AMCG00018999
TU38402 other downstream 761179 995327 ~ 1001213 (+) True G30698
TU38636 other downstream 999346 1233494 ~ 1237637 (+) True AMCG00019030
TU38640 other downstream 1019218 1253366 ~ 1253735 (+) True G30877

Expression Profile