RNA id: AMCG00018981


Basic Information

Item Value
RNA id AMCG00018981
length 606
RNA type mRNA
GC content 0.68
exon number 4
gene id AMCG00018981
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 237250 ~ 245772 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCCGGGCCGAGCCGGGCCTTCCAGAGCTGCGATGTGGGCTGCCCCCCCGGGCGTCTGTACCGGGAGTGTGGGGATGCTGACGGCTGCCCGTACAGTTGTGCCCAGGTGAGCGGGCGCGAGGGCTGCCTTGTGTGCCAGCACGGCCAGTGGAACtgctccctgtctgtctgccctgAAGAGGGGGGCCAGTCCCCCTGGGGCCCCTGGGGGCCATGCTCGCTGTCCTGCGGGGGGCTGGGCCAGAAGACTCGCACACGGGACTGCAACCACCCTGCGCCTGCCCATGGGGTCAGGGACTGTGAGGGCACACGTCTCGAGACCACCTACTGCCAGACCCCAGACTGCCCAGAGGCAGACCGCAGCCCCTGGAAGACCCctaagtgtctgtgtgtctccgCAGAGCCGCCGGACGGGCAGGGGCCCTGGGGCCTGTGGAGCCCCTGCTCACACTCCTGCAATGACGCACACAGACCTGCCCTGAAGGAGCGCCGACGGCAGTGTGAGAGGGAGCCCTGTGCTGGGGAGACACGCCAGGAGAGAGTCTGCAACCTGCCCCAGTGCCCCGGTATTACCCCACTCCCCAGTGTGtcagagagtgtgtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38203 lncRNA downstream 9554 255326 ~ 255697 (+) True G30554
TU38232 lncRNA downstream 124674 370446 ~ 371798 (+) True G30583
TU38301 lncRNA downstream 197396 443168 ~ 496520 (+) False G30619
TU38304 lncRNA downstream 246788 492560 ~ 496520 (+) True G30619
TU38302 lncRNA downstream 248548 494320 ~ 496520 (+) False G30619
AMCG00018980 mRNA upstream 6 234187 ~ 237244 (+) True AMCG00018980
AMCG00018979 mRNA upstream 3102 233389 ~ 234148 (+) True AMCG00018979
AMCG00018977 mRNA upstream 4384 200810 ~ 232866 (+) True AMCG00018977
AMCG00018978 mRNA upstream 36842 196318 ~ 200408 (+) True AMCG00018978
AMCG00018982 mRNA upstream 47534 185846 ~ 189716 (+) True AMCG00018982
AMCG00018983 mRNA downstream 326 246098 ~ 255447 (+) True AMCG00018983
AMCG00018984 mRNA downstream 9701 255473 ~ 259291 (+) True AMCG00018984
AMCG00018990 mRNA downstream 165711 411483 ~ 414872 (+) True AMCG00018990
AMCG00018989 mRNA downstream 214387 460159 ~ 473258 (+) True AMCG00018989
AMCG00018998 mRNA downstream 252877 498649 ~ 503431 (+) True AMCG00018998
TU38173 other upstream 163019 73792 ~ 74231 (+) True G30527
TU38241 other downstream 149729 395501 ~ 398672 (+) True G30589
TU38342 other downstream 308994 554766 ~ 556904 (+) False AMCG00018999
TU38402 other downstream 749555 995327 ~ 1001213 (+) True G30698
TU38636 other downstream 987722 1233494 ~ 1237637 (+) True AMCG00019030
TU38640 other downstream 1007594 1253366 ~ 1253735 (+) True G30877

Expression Profile