RNA id: AMCG00018984


Basic Information

Item Value
RNA id AMCG00018984
length 309
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00018984
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 255473 ~ 259291 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTATCTAGAGCACAGTAtcgaaacgtgtcctgtgtccAGCGGGTTAGTGTCcaccctgtctgtgtgtctgtctgtctgtctgtctgtctgtgtctcacaCACCCCTCCCCGTGTGTCGATGGTACAGGAAGTGGAGGCTGGAGTGCATGGAGTAGCTGGACAGACTGTACCAAGTCATGCGGTGGGGGGGTGCGGAGTCGCCAGCGGGAAACGAGGTCACGATCCCAGGACCAAGTCACTGCAGAGGGACTGGACTGGCATGCAGGCCTATCCACTGACCCACTGTCAGAAGGGACCTCTGCACTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38232 lncRNA downstream 111155 370446 ~ 371798 (+) True G30583
TU38301 lncRNA downstream 183877 443168 ~ 496520 (+) False G30619
TU38304 lncRNA downstream 233269 492560 ~ 496520 (+) True G30619
TU38302 lncRNA downstream 235029 494320 ~ 496520 (+) False G30619
TU38383 lncRNA downstream 479935 739226 ~ 741433 (+) False AMCG00019012
AMCG00018983 mRNA upstream 26 246098 ~ 255447 (+) True AMCG00018983
AMCG00018981 mRNA upstream 9701 237250 ~ 245772 (+) True AMCG00018981
AMCG00018980 mRNA upstream 18229 234187 ~ 237244 (+) True AMCG00018980
AMCG00018979 mRNA upstream 21325 233389 ~ 234148 (+) True AMCG00018979
AMCG00018977 mRNA upstream 22607 200810 ~ 232866 (+) True AMCG00018977
AMCG00018990 mRNA downstream 152192 411483 ~ 414872 (+) True AMCG00018990
AMCG00018989 mRNA downstream 200868 460159 ~ 473258 (+) True AMCG00018989
AMCG00018998 mRNA downstream 239358 498649 ~ 503431 (+) True AMCG00018998
AMCG00019000 mRNA downstream 247344 506635 ~ 514431 (+) True AMCG00019000
AMCG00018999 mRNA downstream 290225 549516 ~ 555351 (+) True AMCG00018999
TU38173 other upstream 181242 73792 ~ 74231 (+) True G30527
TU38241 other downstream 136210 395501 ~ 398672 (+) True G30589
TU38342 other downstream 295475 554766 ~ 556904 (+) False AMCG00018999
TU38402 other downstream 736036 995327 ~ 1001213 (+) True G30698
TU38636 other downstream 974203 1233494 ~ 1237637 (+) True AMCG00019030
TU38640 other downstream 994075 1253366 ~ 1253735 (+) True G30877

Expression Profile