Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00019017 |
| length | 531 |
| RNA type | mRNA |
| GC content | 0.69 |
| exon number | 4 |
| gene id | AMCG00019017 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 837999 ~ 847327 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38383 | lncRNA | upstream | 96566 | 739226 ~ 741433 (+) | False | AMCG00019012 |
| TU38301 | lncRNA | upstream | 341479 | 443168 ~ 496520 (+) | False | G30619 |
| TU38304 | lncRNA | upstream | 341479 | 492560 ~ 496520 (+) | True | G30619 |
| TU38302 | lncRNA | upstream | 341479 | 494320 ~ 496520 (+) | False | G30619 |
| TU38232 | lncRNA | upstream | 466201 | 370446 ~ 371798 (+) | True | G30583 |
| TU38404 | lncRNA | downstream | 161934 | 1009261 ~ 1026744 (+) | True | G30699 |
| TU38405 | lncRNA | downstream | 165684 | 1013011 ~ 1053885 (+) | True | G30700 |
| TU38435 | lncRNA | downstream | 291178 | 1138505 ~ 1139858 (+) | False | G30723 |
| TU38436 | lncRNA | downstream | 291178 | 1138505 ~ 1139858 (+) | False | G30723 |
| TU38437 | lncRNA | downstream | 291178 | 1138505 ~ 1139858 (+) | False | G30723 |
| AMCG00019013 | mRNA | upstream | 57370 | 780393 ~ 780629 (+) | True | AMCG00019013 |
| AMCG00019011 | mRNA | upstream | 86959 | 744154 ~ 751040 (+) | True | AMCG00019011 |
| AMCG00019012 | mRNA | upstream | 93916 | 740473 ~ 744083 (+) | True | AMCG00019012 |
| AMCG00019009 | mRNA | upstream | 135753 | 701324 ~ 702246 (+) | True | AMCG00019009 |
| AMCG00019008 | mRNA | upstream | 214652 | 608775 ~ 623347 (+) | True | AMCG00019008 |
| AMCG00019016 | mRNA | downstream | 13156 | 860483 ~ 861397 (+) | True | AMCG00019016 |
| AMCG00019021 | mRNA | downstream | 250902 | 1098229 ~ 1114219 (+) | True | AMCG00019021 |
| AMCG00019020 | mRNA | downstream | 330793 | 1178120 ~ 1183904 (+) | True | AMCG00019020 |
| AMCG00019029 | mRNA | downstream | 350659 | 1197986 ~ 1198981 (+) | True | AMCG00019029 |
| AMCG00019030 | mRNA | downstream | 366349 | 1213676 ~ 1236181 (+) | False | AMCG00019030 |
| TU38342 | other | upstream | 281095 | 554766 ~ 556904 (+) | False | AMCG00018999 |
| TU38241 | other | upstream | 439327 | 395501 ~ 398672 (+) | True | G30589 |
| TU38173 | other | upstream | 763768 | 73792 ~ 74231 (+) | True | G30527 |
| TU38402 | other | downstream | 148000 | 995327 ~ 1001213 (+) | True | G30698 |
| TU38636 | other | downstream | 386167 | 1233494 ~ 1237637 (+) | True | AMCG00019030 |
| TU38640 | other | downstream | 406039 | 1253366 ~ 1253735 (+) | True | G30877 |
| TU38794 | other | downstream | 1014502 | 1861829 ~ 1871379 (+) | False | AMCG00019064 |
| TU38962 | other | downstream | 1294503 | 2141830 ~ 2147563 (+) | False | G31110 |
