RNA id: AMCG00019061



Basic Information


Item Value
RNA id AMCG00019061
length 690
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00019061
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2061717 ~ 2062756 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcTGATGCCGTGTCAACACTGAGACAGACCATCGTCCGGACAGGAGCATCAGTCACCATCCCTTGTCACTACGAggacaaacacaaaagccaTGTGAAATACTGGTGCTCTGGGATATTCTGGTTTAACTGTGTGACtgtaatacacacaaacaatcaGATTGAAAACAGTGATAAAGTGTCCATCTCTGATGATCCAGTCCAGGGAGTCTTCACTGTGACCATGAGGGGACTGGAGACGGGGGATTCAGGCTGGTACTGGTGTGCTGTGATTGAAAACGGATTTGATAAAGGCGTATCTCTGTACCTCACAGTCACTGAAGACGCTGCGGTGCCGTATGTGGTCAATCCCACAATAACAGGACAGATAGGAGGGGAGGTCAGTGTCCAGTGTCTCTATGGACACCCATACCAGTCCAGACAGAAACAGTGGTGCAGGAGTGGAGACTGGAGCTCCTGTCAGACAGCAGGAAGCCCTGGGACTGCAGGACACGGCTCTGTCCTGATCACTGACCACACAGCGGAGGGACTCTTCAGTGTGACTGTGAGCGGACTGCGGCCGGAGGACCAAGGCTGGTACTGGTGTGATATAGGGGATCAACAGCTTCCTGTTTACCTCAGTGTCACTAGCGGTAACAGAGCAGTTTTCACGCTGCAGACACCCACAGACATGGACTCCAGCTCGTTACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU38814 lncRNA upstream 123499 1937820 ~ 1938218 (+) True G30996
TU38795 lncRNA upstream 176166 1878331 ~ 1885551 (+) True AMCG00019064
TU38719 lncRNA upstream 462488 1597798 ~ 1599229 (+) True AMCG00019046
TU38952 lncRNA downstream 34425 2097181 ~ 2099152 (+) True G31104
TU38970 lncRNA downstream 114392 2177148 ~ 2177356 (+) True G31117
TU38999 lncRNA downstream 126212 2188968 ~ 2209189 (+) True G31141
TU39001 lncRNA downstream 128665 2191421 ~ 2192208 (+) True G31143
TU39092 lncRNA downstream 341370 2404126 ~ 2409887 (+) True G31217
AMCG00019062 mRNA upstream 27303 2031254 ~ 2034414 (+) True AMCG00019062
AMCG00019063 mRNA upstream 31141 2017146 ~ 2030576 (+) True AMCG00019063
AMCG00019060 mRNA upstream 81220 1975590 ~ 1980497 (+) True AMCG00019060
AMCG00019064 mRNA upstream 176479 1862316 ~ 1885238 (+) False AMCG00019064
AMCG00019056 mRNA upstream 209348 1842788 ~ 1852369 (+) True AMCG00019056
AMCG00019068 mRNA downstream 107320 2170076 ~ 2174807 (+) True AMCG00019068
AMCG00019072 mRNA downstream 115171 2177927 ~ 2188659 (+) True AMCG00019072
AMCG00019075 mRNA downstream 217886 2280642 ~ 2291671 (+) True AMCG00019075
AMCG00019076 mRNA downstream 302850 2365606 ~ 2369242 (+) True AMCG00019076
AMCG00019081 mRNA downstream 313239 2375995 ~ 2378374 (+) True AMCG00019081
TU38794 other upstream 190338 1861829 ~ 1871379 (+) False AMCG00019064
TU38640 other upstream 807982 1253366 ~ 1253735 (+) True G30877
TU38636 other upstream 824080 1233494 ~ 1237637 (+) True AMCG00019030
TU38402 other upstream 1060504 995327 ~ 1001213 (+) True G30698
TU38342 other upstream 1504813 554766 ~ 556904 (+) False AMCG00018999
TU38962 other downstream 79074 2141830 ~ 2147563 (+) False G31110
TU38960 other downstream 81165 2143921 ~ 2147563 (+) True G31110
TU39281 other downstream 1031722 3094478 ~ 3096426 (+) False AMCG00019096
TU39314 other downstream 1141031 3203787 ~ 3210683 (+) False AMCG00019100
TU39316 other downstream 1141031 3203787 ~ 3210683 (+) False AMCG00019100

Expression Profile