RNA id: AMCG00019065


Basic Information

Item Value
RNA id AMCG00019065
length 402
RNA type mRNA
GC content 0.65
exon number 2
gene id AMCG00019065
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2020365 ~ 2030234 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGCTTCCTGGAGCTCGAAGCCATTGCTGCACACAGTTCCCCTCTGGCCTCTGTGATACACATCCACTCTGCCCCCACAGgGGGTCTGCAGGTGAGGCTGAGCAACCCGTGCTCTGGGAGAGTGCAGGTGCAGTTCGAGGGCCAGTGGGGCCCTGTGTGCAGTCACTCCTGGGACCTGCGCGATGCAGAGGTGCTCTGCCAACAGCTGGGCTGTGGGGCGGCGGTGGCGGCGCCCCATCTTCTCCACCCCCAGGATGCCTCTGAGGACAGAGTGCTGAGCAGAGTGGGCTGCCTGGGCAACGAGACGGAGCTGGGGGAGTGCAGGGCCGGGCCCCTGGGGGCCAAGGACTGCCAGCACCCGTGGGACGCAGCTGTCATCTGTGCAGGTACATCAGCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38926 lncRNA downstream 86951 1932341 ~ 1933414 (-) False G31082
TU38916 lncRNA downstream 123933 1885673 ~ 1896432 (-) False AMCG00019059
TU38918 lncRNA downstream 123933 1885673 ~ 1896432 (-) False AMCG00019059
TU38907 lncRNA downstream 139182 1870371 ~ 1881183 (-) True G31074
TU38995 lncRNA upstream 145928 2176162 ~ 2176966 (-) True G31137
TU39093 lncRNA upstream 374180 2404414 ~ 2409880 (-) True G31218
TU39114 lncRNA upstream 444450 2474684 ~ 2474983 (-) True G31234
TU39116 lncRNA upstream 449704 2479938 ~ 2480415 (-) True G31236
TU39124 lncRNA upstream 463603 2493837 ~ 2494055 (-) True G31244
AMCG00019066 mRNA downstream 9208 1986105 ~ 2011157 (-) True AMCG00019066
AMCG00019067 mRNA downstream 63305 1938545 ~ 1957060 (-) True AMCG00019067
AMCG00019059 mRNA downstream 134395 1882454 ~ 1885970 (-) True AMCG00019059
AMCG00019058 mRNA downstream 178879 1833471 ~ 1841486 (-) True AMCG00019058
AMCG00019055 mRNA downstream 319815 1685165 ~ 1700550 (-) True AMCG00019055
AMCG00019070 mRNA upstream 8465 2038699 ~ 2049084 (-) True AMCG00019070
AMCG00019069 mRNA upstream 66750 2096984 ~ 2098809 (-) True AMCG00019069
AMCG00019071 mRNA upstream 110287 2140521 ~ 2141953 (-) True AMCG00019071
AMCG00019074 mRNA upstream 161162 2191396 ~ 2203852 (-) True AMCG00019074
AMCG00019073 mRNA upstream 178556 2208790 ~ 2234517 (-) True AMCG00019073
TU38861 other downstream 309822 1705899 ~ 1710543 (-) False G31035
TU38662 other downstream 696769 1321614 ~ 1323596 (-) True AMCG00019034
TU38658 other downstream 697332 1321614 ~ 1323033 (-) False AMCG00019034
TU38605 other downstream 842799 1175089 ~ 1177566 (-) False AMCG00019024
TU38606 other downstream 845382 1174536 ~ 1174983 (-) False G30849
TU38923 other upstream 8413 2038647 ~ 2083271 (-) False G31082
TU38988 other upstream 147746 2177980 ~ 2178650 (-) True G31130
TU39603 other upstream 2902604 4932838 ~ 4935996 (-) False AMCG00019129
TU41485 other upstream 11631882 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 12461657 14491891 ~ 14492218 (-) True G33163