RNA id: AMCG00019068



Basic Information


Item Value
RNA id AMCG00019068
length 390
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00019068
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2170076 ~ 2174807 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGGGCTCAGTGCCAGGGGGGAGTGTCTGAGGGGCAGGGAGCTGAGGAGCCACAGAGCCCAGTCCTCAGACCTGCTGCTCCCCCAGCGCTGAGAGGAAGATGAGCCGCCTGCTGCCTGTGCTGCTGCTCACTGCCGGGGCCCTGCTGGCCCCCACCAAGGGGCAGGGAGAGACAGACTTTAACAAGCTCTCTGATGTCTTGAAGACAGCGGTCAACCTGGCCATCAAAGACTGCAATGAGAAAAAATTATTTAAGGACCATTTGAATTTCTTCAGCACCATCGAGCCAACgGGTCCAGAGGCTGGAGGGGTGCTGGGTCAGGAGTTCAGTCCAGCTCTAGGGAGAGACAAGCAGCGCAGCCTGGGATCCCCTCCCTTTCTGACCAgctga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU38952 lncRNA upstream 70924 2097181 ~ 2099152 (+) True G31104
TU38724 lncRNA upstream 86807 2038647 ~ 2083269 (+) True G30943
TU38814 lncRNA upstream 231858 1937820 ~ 1938218 (+) True G30996
TU38795 lncRNA upstream 284525 1878331 ~ 1885551 (+) True AMCG00019064
TU38719 lncRNA upstream 570847 1597798 ~ 1599229 (+) True AMCG00019046
TU38970 lncRNA downstream 2341 2177148 ~ 2177356 (+) True G31117
TU38999 lncRNA downstream 14161 2188968 ~ 2209189 (+) True G31141
TU39001 lncRNA downstream 16614 2191421 ~ 2192208 (+) True G31143
TU39092 lncRNA downstream 229319 2404126 ~ 2409887 (+) True G31217
TU39148 lncRNA downstream 390702 2565509 ~ 2566978 (+) False AMCG00019089
AMCG00019061 mRNA upstream 107320 2061717 ~ 2062756 (+) True AMCG00019061
AMCG00019062 mRNA upstream 135662 2031254 ~ 2034414 (+) True AMCG00019062
AMCG00019063 mRNA upstream 139500 2017146 ~ 2030576 (+) True AMCG00019063
AMCG00019060 mRNA upstream 189579 1975590 ~ 1980497 (+) True AMCG00019060
AMCG00019064 mRNA upstream 284838 1862316 ~ 1885238 (+) False AMCG00019064
AMCG00019072 mRNA downstream 3120 2177927 ~ 2188659 (+) True AMCG00019072
AMCG00019075 mRNA downstream 105835 2280642 ~ 2291671 (+) True AMCG00019075
AMCG00019076 mRNA downstream 190799 2365606 ~ 2369242 (+) True AMCG00019076
AMCG00019081 mRNA downstream 201188 2375995 ~ 2378374 (+) True AMCG00019081
AMCG00019082 mRNA downstream 216900 2391707 ~ 2402129 (+) True AMCG00019082
TU38962 other upstream 22513 2141830 ~ 2147563 (+) False G31110
TU38960 other upstream 22513 2143921 ~ 2147563 (+) True G31110
TU38794 other upstream 298697 1861829 ~ 1871379 (+) False AMCG00019064
TU38640 other upstream 916341 1253366 ~ 1253735 (+) True G30877
TU38636 other upstream 932439 1233494 ~ 1237637 (+) True AMCG00019030
TU39281 other downstream 919671 3094478 ~ 3096426 (+) False AMCG00019096
TU39314 other downstream 1028980 3203787 ~ 3210683 (+) False AMCG00019100
TU39316 other downstream 1028980 3203787 ~ 3210683 (+) False AMCG00019100
TU40051 other downstream 5245694 7420501 ~ 7421083 (+) True G32005
TU40197 other downstream 6170648 8345455 ~ 8384592 (+) False G32130

Expression Profile