RNA id: AMCG00019102


Basic Information

Item Value
RNA id AMCG00019102
length 240
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00019102
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3171748 ~ 3173436 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGAAGAGCACAGGCAACCAGAAGCCAAAGCACATGCATCTCTCTGATACTCAGGCCCAGACCCAGCTGGCAGCATGGGCTGGACAATGGACCCCAGAAGAGGGGGCTGGACAGCTAGCCATGGCCTTGGATGGCAGAGCTCGACAGGCCCCCTGGACGTGCCAGAAGAGTGACGACAAGAATTTGGGGCTCTCATCACAGCTCTACAACAGCGATTCGGAGCTGGGGAACAACTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU39287 lncRNA downstream 74408 3096709 ~ 3097340 (-) True G31363
TU39269 lncRNA downstream 315089 2854448 ~ 2856659 (-) True G31346
TU39249 lncRNA downstream 533628 2635184 ~ 2638120 (-) True G31329
TU39218 lncRNA downstream 600460 2566801 ~ 2571288 (-) True G31300
TU39214 lncRNA downstream 608954 2561475 ~ 2562794 (-) True G31296
TU39319 lncRNA upstream 15291 3188727 ~ 3190187 (-) True G31390
TU39328 lncRNA upstream 37968 3211404 ~ 3211605 (-) True G31399
TU39363 lncRNA upstream 171421 3344857 ~ 3345240 (-) True G31431
TU39376 lncRNA upstream 428964 3602400 ~ 3602611 (-) True G31444
TU39386 lncRNA upstream 460420 3633856 ~ 3638241 (-) True G31454
AMCG00019098 mRNA downstream 3618 3150830 ~ 3168130 (-) True AMCG00019098
AMCG00019097 mRNA downstream 77552 3077890 ~ 3094196 (-) True AMCG00019097
AMCG00019094 mRNA downstream 386390 2768780 ~ 2785358 (-) True AMCG00019094
AMCG00019093 mRNA downstream 412003 2758100 ~ 2759745 (-) True AMCG00019093
AMCG00019091 mRNA downstream 485575 2676315 ~ 2686173 (-) True AMCG00019091
AMCG00019103 mRNA upstream 124902 3298338 ~ 3300086 (-) True AMCG00019103
AMCG00019105 mRNA upstream 705260 3878696 ~ 4065944 (-) True AMCG00019105
AMCG00019110 mRNA upstream 1002039 4175475 ~ 4176838 (-) True AMCG00019110
AMCG00019108 mRNA upstream 1012304 4185740 ~ 4207481 (-) True AMCG00019108
AMCG00019109 mRNA upstream 1047007 4220443 ~ 4229991 (-) True AMCG00019109
TU38988 other downstream 993098 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 1088477 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 1088477 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 1461205 1705899 ~ 1710543 (-) False G31035
TU38662 other downstream 1848152 1321614 ~ 1323596 (-) True AMCG00019034
TU39603 other upstream 1759402 4932838 ~ 4935996 (-) False AMCG00019129
TU41485 other upstream 10488680 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 11318455 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 11318455 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 11778406 14951842 ~ 14991996 (-) True G33259

Expression Profile