Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00019168 |
| length | 975 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 1 |
| gene id | AMCG00019168 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 6769243 ~ 6770217 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007154 | cell communication | biological_process |
| GO:0005922 | connexin complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K07616 | GJC1, GJA7, CX45; gap junction gamma-1 protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39966 | lncRNA | upstream | 76963 | 6691722 ~ 6692280 (+) | True | G31930 |
| TU39948 | lncRNA | upstream | 90855 | 6678165 ~ 6678388 (+) | True | G31915 |
| TU39947 | lncRNA | upstream | 96066 | 6672898 ~ 6673177 (+) | True | G31914 |
| TU39915 | lncRNA | upstream | 332536 | 6435691 ~ 6436707 (+) | False | G31894 |
| TU39914 | lncRNA | upstream | 333254 | 6434199 ~ 6435989 (+) | True | G31894 |
| TU39986 | lncRNA | downstream | 49548 | 6819765 ~ 6820035 (+) | True | G31947 |
| TU40036 | lncRNA | downstream | 454415 | 7224632 ~ 7224997 (+) | True | G31992 |
| TU40059 | lncRNA | downstream | 661463 | 7431680 ~ 7431944 (+) | True | G32010 |
| TU40100 | lncRNA | downstream | 850287 | 7620504 ~ 7620812 (+) | True | G32048 |
| TU40173 | lncRNA | downstream | 1401428 | 8171645 ~ 8171861 (+) | True | G32113 |
| AMCG00019167 | mRNA | upstream | 63351 | 6704357 ~ 6705892 (+) | True | AMCG00019167 |
| AMCG00019169 | mRNA | upstream | 78159 | 6689915 ~ 6691084 (+) | True | AMCG00019169 |
| AMCG00019163 | mRNA | upstream | 101098 | 6606972 ~ 6668145 (+) | True | AMCG00019163 |
| AMCG00019162 | mRNA | upstream | 202750 | 6485078 ~ 6566493 (+) | True | AMCG00019162 |
| AMCG00019160 | mRNA | upstream | 388898 | 6355260 ~ 6380345 (+) | True | AMCG00019160 |
| AMCG00019171 | mRNA | downstream | 53018 | 6823235 ~ 6832585 (+) | True | AMCG00019171 |
| AMCG00019172 | mRNA | downstream | 127601 | 6897818 ~ 6907983 (+) | True | AMCG00019172 |
| AMCG00019173 | mRNA | downstream | 137916 | 6908133 ~ 6917381 (+) | True | AMCG00019173 |
| AMCG00019178 | mRNA | downstream | 589386 | 7359603 ~ 7379672 (+) | True | AMCG00019178 |
| AMCG00019180 | mRNA | downstream | 613222 | 7383439 ~ 7394256 (+) | True | AMCG00019180 |
| TU39314 | other | upstream | 3558560 | 3203787 ~ 3210683 (+) | False | AMCG00019100 |
| TU39316 | other | upstream | 3558560 | 3203787 ~ 3210683 (+) | False | AMCG00019100 |
| TU39281 | other | upstream | 3672817 | 3094478 ~ 3096426 (+) | False | AMCG00019096 |
| TU38962 | other | upstream | 4621680 | 2141830 ~ 2147563 (+) | False | G31110 |
| TU40051 | other | downstream | 650284 | 7420501 ~ 7421083 (+) | True | G32005 |
| TU40197 | other | downstream | 1575238 | 8345455 ~ 8384592 (+) | False | G32130 |
| TU40199 | other | downstream | 1575238 | 8345455 ~ 8384592 (+) | True | G32130 |
| TU40426 | other | downstream | 2491157 | 9261374 ~ 9539211 (+) | True | G32286 |
| TU40432 | other | downstream | 2559262 | 9329479 ~ 9348819 (+) | True | AMCG00019215 |
