RNA id: AMCG00019186


Basic Information

Item Value
RNA id AMCG00019186
length 747
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00019186
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 7599869 ~ 7607375 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATTTCCAGTCGGCCGTCCCGGTGTCGGTCTCGGTGTCCGGCATCTCCCAGCAGTCGCAGCCGGCCATGCCCACCCCCGGCACGGTCCCGGCTCCGGTGCCGGTCCCGGTGCCCCCCTCCATCCCGTCCCAGTTCGGATCCGGACCGTCCTCGGGCTCGGCGGCGTCTCAGTTCGGGTCGGGCACGGTGTCGGGCCAAGGCGCCCAGTCCGGCCCGCCCGGGTCGCAGTTCGTGTTGTCCAACTCGGCGGCCATCCGGGGCGAGATCCAGCGGTTCGAGTCGGTCCACCCGAACATTTACGCCATTTACGACCTGATCGAGCGCATCGACGACCTGGCCCTGCAGAACCAGATCCGGGAGCACGTCATATCCATCGAGGTGCAAGCACCGGCAGAGCTGCGTGTGCTACCGGACCCTGACTCGAACCGGATCACCACAGCGAGTGTCTGTGGCGGGGGCTGGGGcgggggctggggctggggctgccCACGCCGGTGCTGTGTGGAGCCCCGTGTCGCACTGTGGGGCTCGACCGCAGAGATGAGTGCTGCGCTGGCCTCACGCCGGCTCCTGCGCCTACGTGCTGTGCGCCGGTTTATTACACACGCATCTCGATCGCAGGAGTGCCTCGTCATCAGGAAGCACGGGTTGTACTGCATGCATGCTGTAAGTATGGTGCAAACTCATCCGATCGATCCAGTGCTGCAGAGTCGACAGGCCATCTTTATACGAAAGTGCAGATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU40089 lncRNA downstream 180016 7416085 ~ 7419853 (-) True G32037
TU40042 lncRNA downstream 308739 7290851 ~ 7291130 (-) True G31997
TU40037 lncRNA downstream 374872 7224589 ~ 7224997 (-) True G31993
TU39969 lncRNA downstream 907566 6689836 ~ 6692303 (-) True G31933
TU39968 lncRNA downstream 910353 6688860 ~ 6689516 (-) True G31932
TU40109 lncRNA upstream 66380 7673755 ~ 7687169 (-) True G32057
TU40113 lncRNA upstream 95467 7702842 ~ 7703076 (-) True G32061
TU40129 lncRNA upstream 147878 7755253 ~ 7758227 (-) True G32076
TU40156 lncRNA upstream 363818 7971193 ~ 7972225 (-) True G32096
TU40245 lncRNA upstream 730661 8338036 ~ 8375404 (-) True G32144
AMCG00019184 mRNA downstream 100326 7480093 ~ 7499543 (-) True AMCG00019184
AMCG00019185 mRNA downstream 129606 7445886 ~ 7470263 (-) True AMCG00019185
AMCG00019182 mRNA downstream 166231 7431674 ~ 7433638 (-) True AMCG00019182
AMCG00019183 mRNA downstream 177547 7420743 ~ 7422322 (-) True AMCG00019183
AMCG00019179 mRNA downstream 261631 7337847 ~ 7338238 (-) True AMCG00019179
AMCG00019204 mRNA upstream 1019639 8627014 ~ 8636548 (-) True AMCG00019204
AMCG00019203 mRNA upstream 1029175 8636550 ~ 8662947 (-) True AMCG00019203
AMCG00019209 mRNA upstream 1239776 8847151 ~ 8901878 (-) True AMCG00019209
AMCG00019207 mRNA upstream 1361511 8968886 ~ 8984696 (-) True AMCG00019207
AMCG00019208 mRNA upstream 1426416 9033791 ~ 9044972 (-) True AMCG00019208
TU39603 other downstream 2663873 4932838 ~ 4935996 (-) False AMCG00019129
TU38988 other downstream 5421219 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 5516598 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 5516598 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 5889326 1705899 ~ 1710543 (-) False G31035
TU41485 other upstream 6054741 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 6884516 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 6884516 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 7344467 14951842 ~ 14991996 (-) True G33259
TU41832 other upstream 8085107 15692482 ~ 15721452 (-) True G33381

Expression Profile