RNA id: AMCG00019189



Basic Information


Item Value
RNA id AMCG00019189
length 321
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00019189
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 7721840 ~ 7723326 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGGAGCTAACGTTTGAACAGGACTGCTTGGTGGAAGGTGGGAAGATGGGCCAGATGACCAATGGGATGGAGTACAAGGAGATCCAGCACTTGGGACAATCGCTGCGCAAGGACCTTATAGAAGCCAATTTCTACAGTGCCACCCTGGCGGACTCGCGCGGTTTTTATGTGCTGGACCTGCACTACCACTTCCGCGTCAGCCTACAGCACCGTGTGAAGGATGGTATACACTGGGACAGCGGGGCCCACCGCTTCTTGCTGGCGTGGTACTGCCCGACAGCCACCTCCAGTGATCATGGGAAGGAGTCCAGGGGCAACAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40100 lncRNA upstream 101028 7620504 ~ 7620812 (+) True G32048
TU40059 lncRNA upstream 289896 7431680 ~ 7431944 (+) True G32010
TU40036 lncRNA upstream 496843 7224632 ~ 7224997 (+) True G31992
TU39986 lncRNA upstream 901805 6819765 ~ 6820035 (+) True G31947
TU39966 lncRNA upstream 1029560 6691722 ~ 6692280 (+) True G31930
TU40173 lncRNA downstream 448319 8171645 ~ 8171861 (+) True G32113
TU40198 lncRNA downstream 622129 8345455 ~ 8347293 (+) False G32130
TU40344 lncRNA downstream 1171913 8895239 ~ 8933746 (+) True G32235
TU40402 lncRNA downstream 1440317 9163643 ~ 9222509 (+) True G32268
TU40428 lncRNA downstream 1538048 9261374 ~ 9471843 (+) False G32286
AMCG00019190 mRNA upstream 8982 7711655 ~ 7712858 (+) True AMCG00019190
AMCG00019187 mRNA upstream 20070 7696853 ~ 7701770 (+) True AMCG00019187
AMCG00019181 mRNA upstream 318696 7400255 ~ 7403144 (+) True AMCG00019181
AMCG00019180 mRNA upstream 327584 7383439 ~ 7394256 (+) True AMCG00019180
AMCG00019178 mRNA upstream 342168 7359603 ~ 7379672 (+) True AMCG00019178
AMCG00019188 mRNA downstream 15198 7738524 ~ 7760540 (+) True AMCG00019188
AMCG00019191 mRNA downstream 226172 7949498 ~ 7964176 (+) True AMCG00019191
AMCG00019192 mRNA downstream 259871 7983197 ~ 7983668 (+) True AMCG00019192
AMCG00019193 mRNA downstream 291206 8014532 ~ 8028727 (+) True AMCG00019193
AMCG00019194 mRNA downstream 565748 8289074 ~ 8298766 (+) True AMCG00019194
TU40051 other upstream 300757 7420501 ~ 7421083 (+) True G32005
TU39314 other upstream 4511157 3203787 ~ 3210683 (+) False AMCG00019100
TU39316 other upstream 4511157 3203787 ~ 3210683 (+) False AMCG00019100
TU39281 other upstream 4625414 3094478 ~ 3096426 (+) False AMCG00019096
TU38960 other upstream 5574277 2143921 ~ 2147563 (+) True G31110
TU40197 other downstream 622129 8345455 ~ 8384592 (+) False G32130
TU40199 other downstream 622129 8345455 ~ 8384592 (+) True G32130
TU40426 other downstream 1538048 9261374 ~ 9539211 (+) True G32286
TU40432 other downstream 1606153 9329479 ~ 9348819 (+) True AMCG00019215
TU40438 other downstream 1646572 9369898 ~ 9628662 (+) True G32293

Expression Profile