RNA id: AMCG00019196



Basic Information


Item Value
RNA id AMCG00019196
length 189
RNA type mRNA
GC content 0.56
exon number 1
gene id AMCG00019196
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8423146 ~ 8423334 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGTAAATTGTCGTTTCGGGCACGGGCGCTGGACGCTTCCAAGCCACTACCCGTCTTCCGCTGCGAGGACTTACCCGACCTGCACGAATATGCCTCCATTAACCGGGCCGTGCCGCAGATGCCGACAGGGatggagaaagaggaggaaTCGGTACGTTTTGCAGTTCCAGAAACCTACGTTGGGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40198 lncRNA upstream 75853 8345455 ~ 8347293 (+) False G32130
TU40173 lncRNA upstream 251285 8171645 ~ 8171861 (+) True G32113
TU40100 lncRNA upstream 802334 7620504 ~ 7620812 (+) True G32048
TU40059 lncRNA upstream 991202 7431680 ~ 7431944 (+) True G32010
TU40036 lncRNA upstream 1198149 7224632 ~ 7224997 (+) True G31992
TU40344 lncRNA downstream 471905 8895239 ~ 8933746 (+) True G32235
TU40402 lncRNA downstream 740309 9163643 ~ 9222509 (+) True G32268
TU40428 lncRNA downstream 838040 9261374 ~ 9471843 (+) False G32286
TU40431 lncRNA downstream 885303 9308637 ~ 9324063 (+) True G32287
TU40434 lncRNA downstream 926515 9349849 ~ 9352655 (+) True G32290
AMCG00019199 mRNA upstream 21253 8373800 ~ 8401893 (+) True AMCG00019199
AMCG00019198 mRNA upstream 76694 8337221 ~ 8346452 (+) True AMCG00019198
AMCG00019197 mRNA upstream 100318 8308993 ~ 8322828 (+) True AMCG00019197
AMCG00019194 mRNA upstream 124380 8289074 ~ 8298766 (+) True AMCG00019194
AMCG00019193 mRNA upstream 394419 8014532 ~ 8028727 (+) True AMCG00019193
AMCG00019195 mRNA downstream 24546 8447880 ~ 8461935 (+) True AMCG00019195
AMCG00019201 mRNA downstream 74541 8497875 ~ 8521854 (+) True AMCG00019201
AMCG00019200 mRNA downstream 117279 8540613 ~ 8541305 (+) True AMCG00019200
AMCG00019202 mRNA downstream 154591 8577925 ~ 8606120 (+) True AMCG00019202
AMCG00019205 mRNA downstream 358447 8781781 ~ 8784939 (+) True AMCG00019205
TU40197 other upstream 38554 8345455 ~ 8384592 (+) False G32130
TU40199 other upstream 38554 8345455 ~ 8384592 (+) True G32130
TU40051 other upstream 1002063 7420501 ~ 7421083 (+) True G32005
TU39314 other upstream 5212463 3203787 ~ 3210683 (+) False AMCG00019100
TU39316 other upstream 5212463 3203787 ~ 3210683 (+) False AMCG00019100
TU40426 other downstream 838040 9261374 ~ 9539211 (+) True G32286
TU40432 other downstream 906145 9329479 ~ 9348819 (+) True AMCG00019215
TU40438 other downstream 946564 9369898 ~ 9628662 (+) True G32293
TU40734 other downstream 1981305 10404639 ~ 10409497 (+) True G32539
TU41554 other downstream 6015919 14439253 ~ 14486706 (+) True G33159

Expression Profile