RNA id: AMCG00019204



Basic Information


Item Value
RNA id AMCG00019204
length 297
RNA type mRNA
GC content 0.46
exon number 3
gene id AMCG00019204
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8627014 ~ 8636548 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atggactGGACTCCTTTTCCTCGGAATGGGAGGGAAATCAACCGAGAGGAAACAGAACCACAGTTTGCTCTATACAATATAAGTGTTATTGTTGACGACACAGTGGCTCTGATGCTGTGTTTCAGTTCACTACTGTGTATAAATCCAGTCAGTGTTAAACATTCAAAGGAAGGaaAGGACAAAATCGCTTCATCATCTCACCTTACCATGCCAGAGATATGCTCAGCAGATGTCCCTGTAGACACCGTGGTGCGTCAGTCCCAGCTGATTTCCCCACGAAGCTCCTGGGAAATCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40245 lncRNA downstream 251610 8338036 ~ 8375404 (-) True G32144
TU40246 lncRNA downstream 287321 8338289 ~ 8339693 (-) False G32144
TU40156 lncRNA downstream 654789 7971193 ~ 7972225 (-) True G32096
TU40129 lncRNA downstream 868787 7755253 ~ 7758227 (-) True G32076
TU40113 lncRNA downstream 923938 7702842 ~ 7703076 (-) True G32061
TU40361 lncRNA upstream 210679 8847227 ~ 8852522 (-) False AMCG00019209
TU40495 lncRNA upstream 675886 9312434 ~ 9313777 (-) False AMCG00019213
TU40510 lncRNA upstream 713301 9349849 ~ 9352652 (-) True G32351
TU40816 lncRNA upstream 2331581 10968129 ~ 10968403 (-) True G32586
TU40817 lncRNA upstream 2331969 10968517 ~ 10968773 (-) True G32587
AMCG00019186 mRNA downstream 1019639 7599869 ~ 7607375 (-) True AMCG00019186
AMCG00019184 mRNA downstream 1127471 7480093 ~ 7499543 (-) True AMCG00019184
AMCG00019185 mRNA downstream 1156751 7445886 ~ 7470263 (-) True AMCG00019185
AMCG00019182 mRNA downstream 1193376 7431674 ~ 7433638 (-) True AMCG00019182
AMCG00019183 mRNA downstream 1204692 7420743 ~ 7422322 (-) True AMCG00019183
AMCG00019203 mRNA upstream 2 8636550 ~ 8662947 (-) True AMCG00019203
AMCG00019209 mRNA upstream 210603 8847151 ~ 8901878 (-) True AMCG00019209
AMCG00019207 mRNA upstream 332338 8968886 ~ 8984696 (-) True AMCG00019207
AMCG00019208 mRNA upstream 397243 9033791 ~ 9044972 (-) True AMCG00019208
AMCG00019210 mRNA upstream 572792 9209340 ~ 9214704 (-) True AMCG00019210
TU39603 other downstream 3691018 4932838 ~ 4935996 (-) False AMCG00019129
TU38988 other downstream 6448364 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 6543743 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 6543743 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 6916471 1705899 ~ 1710543 (-) False G31035
TU41485 other upstream 5025568 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 5855343 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 5855343 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 6315294 14951842 ~ 14991996 (-) True G33259
TU41832 other upstream 7055934 15692482 ~ 15721452 (-) True G33381

Expression Profile