RNA id: AMCG00019261



Basic Information


Item Value
RNA id AMCG00019261
length 468
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00019261
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11472122 ~ 11477288 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGAATCAGTGGCCGGGAAGCTCCGATGAAGGAGGCAAAACCTGTGAACCAGCGCCGTTTTGCCGCTATATTTAATGTGGATAACACAACCAAGGAAGATTCTGGAAGATTCCGTTGCATTATTCACTCAGACAAAGGAGTGGGGGTGTCAAATTATGGTGAACTGACTGTAAAACaaCCTCCAGTTCCCATTGCCCCACCTCAGCTCACAGCGGTTGGTGCCACATACCTGTGGATCCAACTCAATGCCAACTCCATCAATGGGGACGGGCCCATCATCGAGAGGGAGGTGGAATACCGCACACTGTCTGGAAGCCTTATCGACATCCAGCCAGTAGACAAGACGACGCATAAAATAGGACATCTGGATCCAGACACAGAGTATGAAATCAGTGTTCTGCTCACAAGACCTTTAGATGGAGGTACTGGTGCCCCTGGACCTCCCCTTAGAGCCAGGACAAAGTGTGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40925 lncRNA upstream 23871 11377956 ~ 11448251 (+) True G32671
TU40745 lncRNA upstream 964059 10463163 ~ 10508063 (+) True G32549
TU40671 lncRNA upstream 1362972 10108906 ~ 10109150 (+) True G32490
TU40608 lncRNA upstream 1552086 9917320 ~ 9920036 (+) True G32437
TU40581 lncRNA upstream 1659485 9809884 ~ 9812637 (+) True G32418
TU40936 lncRNA downstream 155070 11632358 ~ 11637880 (+) True G32674
TU40937 lncRNA downstream 155070 11632358 ~ 11637880 (+) False G32674
TU41061 lncRNA downstream 523675 12000963 ~ 12001164 (+) True G32778
TU41211 lncRNA downstream 1132113 12609401 ~ 12612533 (+) True G32892
TU41212 lncRNA downstream 1135997 12613285 ~ 12613926 (+) True G32893
AMCG00019259 mRNA upstream 118016 11353219 ~ 11354106 (+) True AMCG00019259
AMCG00019255 mRNA upstream 191190 11268008 ~ 11280932 (+) True AMCG00019255
AMCG00019254 mRNA upstream 384427 11077971 ~ 11087695 (+) True AMCG00019254
AMCG00019248 mRNA upstream 762690 10701276 ~ 10709432 (+) True AMCG00019248
AMCG00019245 mRNA upstream 813324 10648579 ~ 10658798 (+) True AMCG00019245
AMCG00019262 mRNA downstream 47911 11525199 ~ 11535371 (+) True AMCG00019262
AMCG00019264 mRNA downstream 76932 11554220 ~ 11567397 (+) True AMCG00019264
AMCG00019263 mRNA downstream 108505 11585793 ~ 11599813 (+) True AMCG00019263
AMCG00019265 mRNA downstream 129728 11607016 ~ 11612075 (+) True AMCG00019265
AMCG00019267 mRNA downstream 163220 11640508 ~ 11648448 (+) True AMCG00019267
TU40734 other upstream 1062625 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 1843460 9369898 ~ 9628662 (+) True G32293
TU40426 other upstream 1932911 9261374 ~ 9539211 (+) True G32286
TU40432 other upstream 2123303 9329479 ~ 9348819 (+) True AMCG00019215
TU40199 other upstream 3087530 8345455 ~ 8384592 (+) True G32130
TU41554 other downstream 2961965 14439253 ~ 14486706 (+) True G33159
TU41707 other downstream 3687060 15164348 ~ 15169841 (+) True G33283
TU41862 other downstream 4566654 16043942 ~ 16081943 (+) True G33406
TU42780 other downstream 9130186 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 9130186 20607474 ~ 20610889 (+) True G34170

Expression Profile