RNA id: AMCG00019264



Basic Information


Item Value
RNA id AMCG00019264
length 424
RNA type mRNA
GC content 0.48
exon number 3
gene id AMCG00019264
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11554220 ~ 11567397 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAACTTGCAAAGAAACGAAAGGAGACATTAAGTAGCACAAGACAAGAGATGACGGTGATGGTTAACTCGATGGACAAGAGCTACACTGAACAGGGCACGAACTGTGATGAAGCTTTCTCGTTCATGGACACGCACAACCTCAATGGAAGAAATGAAAACCACACGATGGTGAGTGACACGAGCAGCCTGGTGCAATCGCACTCCTATAAGAAGAGGGAGCCGGTCGATGTGCCATACCAGACTGGCCAGCTGCACCCAGCCATTCGAGTGGCCGACCTCCTGCAACACATCACCCAGATGAAATGTGCGGAGGGCTATGGCTTCAAAGAGGAGTATGAGaGTTTTTTTGAAGGACAGTCTGCACCTTGGGAATCTGCAAAGAAAGATGAGAACAGAATGAAGAACAGATACGGGAATATCATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40925 lncRNA upstream 105969 11377956 ~ 11448251 (+) True G32671
TU40745 lncRNA upstream 1046157 10463163 ~ 10508063 (+) True G32549
TU40671 lncRNA upstream 1445070 10108906 ~ 10109150 (+) True G32490
TU40608 lncRNA upstream 1634184 9917320 ~ 9920036 (+) True G32437
TU40581 lncRNA upstream 1741583 9809884 ~ 9812637 (+) True G32418
TU40936 lncRNA downstream 64961 11632358 ~ 11637880 (+) True G32674
TU40937 lncRNA downstream 64961 11632358 ~ 11637880 (+) False G32674
TU41061 lncRNA downstream 433566 12000963 ~ 12001164 (+) True G32778
TU41211 lncRNA downstream 1042004 12609401 ~ 12612533 (+) True G32892
TU41212 lncRNA downstream 1045888 12613285 ~ 12613926 (+) True G32893
AMCG00019262 mRNA upstream 18849 11525199 ~ 11535371 (+) True AMCG00019262
AMCG00019261 mRNA upstream 76932 11472122 ~ 11477288 (+) True AMCG00019261
AMCG00019259 mRNA upstream 200114 11353219 ~ 11354106 (+) True AMCG00019259
AMCG00019255 mRNA upstream 273288 11268008 ~ 11280932 (+) True AMCG00019255
AMCG00019254 mRNA upstream 466525 11077971 ~ 11087695 (+) True AMCG00019254
AMCG00019263 mRNA downstream 18396 11585793 ~ 11599813 (+) True AMCG00019263
AMCG00019265 mRNA downstream 39619 11607016 ~ 11612075 (+) True AMCG00019265
AMCG00019267 mRNA downstream 73111 11640508 ~ 11648448 (+) True AMCG00019267
AMCG00019260 mRNA downstream 102498 11669895 ~ 11697021 (+) True AMCG00019260
AMCG00019271 mRNA downstream 213004 11780401 ~ 11785241 (+) True AMCG00019271
TU40734 other upstream 1144723 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 1925558 9369898 ~ 9628662 (+) True G32293
TU40426 other upstream 2015009 9261374 ~ 9539211 (+) True G32286
TU40432 other upstream 2205401 9329479 ~ 9348819 (+) True AMCG00019215
TU40199 other upstream 3169628 8345455 ~ 8384592 (+) True G32130
TU41554 other downstream 2871856 14439253 ~ 14486706 (+) True G33159
TU41707 other downstream 3596951 15164348 ~ 15169841 (+) True G33283
TU41862 other downstream 4476545 16043942 ~ 16081943 (+) True G33406
TU42780 other downstream 9040077 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 9040077 20607474 ~ 20610889 (+) True G34170

Expression Profile