Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00019267 |
| length | 1347 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 4 |
| gene id | AMCG00019267 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 11640508 ~ 11648448 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0010629 | negative regulation of gene expression | biological_process |
| GO:0006401 | RNA catabolic process | biological_process |
| GO:0006402 | mRNA catabolic process | biological_process |
| GO:0000956 | nuclear-transcribed mRNA catabolic process | biological_process |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| GO:0034655 | nucleobase-containing compound catabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU40936 | lncRNA | upstream | 2628 | 11632358 ~ 11637880 (+) | True | G32674 |
| TU40937 | lncRNA | upstream | 2628 | 11632358 ~ 11637880 (+) | False | G32674 |
| TU40925 | lncRNA | upstream | 192257 | 11377956 ~ 11448251 (+) | True | G32671 |
| TU40745 | lncRNA | upstream | 1132445 | 10463163 ~ 10508063 (+) | True | G32549 |
| TU40671 | lncRNA | upstream | 1531358 | 10108906 ~ 10109150 (+) | True | G32490 |
| TU41061 | lncRNA | downstream | 352515 | 12000963 ~ 12001164 (+) | True | G32778 |
| TU41211 | lncRNA | downstream | 960953 | 12609401 ~ 12612533 (+) | True | G32892 |
| TU41212 | lncRNA | downstream | 964837 | 12613285 ~ 12613926 (+) | True | G32893 |
| TU41445 | lncRNA | downstream | 1662966 | 13311414 ~ 13311742 (+) | True | G33075 |
| TU41465 | lncRNA | downstream | 1985254 | 13633702 ~ 13638171 (+) | True | G33093 |
| AMCG00019265 | mRNA | upstream | 28433 | 11607016 ~ 11612075 (+) | True | AMCG00019265 |
| AMCG00019263 | mRNA | upstream | 40695 | 11585793 ~ 11599813 (+) | True | AMCG00019263 |
| AMCG00019264 | mRNA | upstream | 73111 | 11554220 ~ 11567397 (+) | True | AMCG00019264 |
| AMCG00019262 | mRNA | upstream | 105137 | 11525199 ~ 11535371 (+) | True | AMCG00019262 |
| AMCG00019261 | mRNA | upstream | 163220 | 11472122 ~ 11477288 (+) | True | AMCG00019261 |
| AMCG00019260 | mRNA | downstream | 21447 | 11669895 ~ 11697021 (+) | True | AMCG00019260 |
| AMCG00019271 | mRNA | downstream | 131953 | 11780401 ~ 11785241 (+) | True | AMCG00019271 |
| AMCG00019269 | mRNA | downstream | 172575 | 11821023 ~ 11838760 (+) | True | AMCG00019269 |
| AMCG00019270 | mRNA | downstream | 192695 | 11841143 ~ 11853279 (+) | True | AMCG00019270 |
| AMCG00019268 | mRNA | downstream | 212428 | 11860876 ~ 11867010 (+) | True | AMCG00019268 |
| TU40734 | other | upstream | 1231011 | 10404639 ~ 10409497 (+) | True | G32539 |
| TU40438 | other | upstream | 2011846 | 9369898 ~ 9628662 (+) | True | G32293 |
| TU40426 | other | upstream | 2101297 | 9261374 ~ 9539211 (+) | True | G32286 |
| TU40432 | other | upstream | 2291689 | 9329479 ~ 9348819 (+) | True | AMCG00019215 |
| TU40199 | other | upstream | 3255916 | 8345455 ~ 8384592 (+) | True | G32130 |
| TU41554 | other | downstream | 2790805 | 14439253 ~ 14486706 (+) | True | G33159 |
| TU41707 | other | downstream | 3515900 | 15164348 ~ 15169841 (+) | True | G33283 |
| TU41862 | other | downstream | 4395494 | 16043942 ~ 16081943 (+) | True | G33406 |
| TU42780 | other | downstream | 8959026 | 20607474 ~ 20610889 (+) | False | G34170 |
| TU42783 | other | downstream | 8959026 | 20607474 ~ 20610889 (+) | True | G34170 |
