RNA id: AMCG00019298



Basic Information


Item Value
RNA id AMCG00019298
length 456
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00019298
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12926782 ~ 12928334 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACGACGGTAATTGAATACGTGAAACCCTCTGACCTCAAGAAAGACATGAATGAGACCTTTAAGGAGAAGTTCCCTCACATCAGGCTGACTCTCAGTAAGATAAGAAGCCTGAAGAGGGAAATGCGAAAGCTGGCCCAGGAGGAGTGTGGCTTCGAGGAGCCCACTGTGGCCATGGCCTTCGTCTACTTCGAGAAGCTCGCTCTCCGGGGGAAACTCAACAAGCAAAACCGCAAGCTGTGTGCTGGAGCCTGCGTGCTCCTCGCTGCCAAAATAGGGAGTGACCTCAGGAAGCATGAGGTTAAGCATTTGATAGATaaactggaagAGAAGTTTCGTCTGAACCGACGTGAGCTCATAGCGTTTGAATTCCCAGTGCTGGTGGCTCTCGAGTTCAGCCTCCATCTTCCCGAGCATGAAGTGATGCCCCACTACAGACGACTCCTCCAAAACTCCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU41212 lncRNA upstream 312856 12613285 ~ 12613926 (+) True G32893
TU41211 lncRNA upstream 314249 12609401 ~ 12612533 (+) True G32892
TU41061 lncRNA upstream 925618 12000963 ~ 12001164 (+) True G32778
TU40936 lncRNA upstream 1288902 11632358 ~ 11637880 (+) True G32674
TU41445 lncRNA downstream 383080 13311414 ~ 13311742 (+) True G33075
TU41465 lncRNA downstream 705368 13633702 ~ 13638171 (+) True G33093
TU41531 lncRNA downstream 1224468 14152802 ~ 14160703 (+) True G33141
TU41546 lncRNA downstream 1357231 14285565 ~ 14286016 (+) True G33153
TU41557 lncRNA downstream 1563558 14491892 ~ 14492206 (+) True G33161
AMCG00019296 mRNA upstream 10066 12905474 ~ 12916716 (+) True AMCG00019296
AMCG00019300 mRNA upstream 44256 12881981 ~ 12882526 (+) True AMCG00019300
AMCG00019297 mRNA upstream 53728 12858980 ~ 12873054 (+) True AMCG00019297
AMCG00019295 mRNA upstream 148167 12767954 ~ 12778615 (+) True AMCG00019295
AMCG00019293 mRNA upstream 204572 12708565 ~ 12722210 (+) True AMCG00019293
AMCG00019294 mRNA downstream 42641 12970975 ~ 12977312 (+) True AMCG00019294
AMCG00019299 mRNA downstream 49965 12978299 ~ 12985783 (+) True AMCG00019299
AMCG00019305 mRNA downstream 78775 13007109 ~ 13030766 (+) True AMCG00019305
AMCG00019304 mRNA downstream 103318 13031652 ~ 13112713 (+) True AMCG00019304
AMCG00019307 mRNA downstream 213277 13141611 ~ 13149184 (+) True AMCG00019307
TU40734 other upstream 2517285 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 3298120 9369898 ~ 9628662 (+) True G32293
TU40426 other upstream 3387571 9261374 ~ 9539211 (+) True G32286
TU40432 other upstream 3577963 9329479 ~ 9348819 (+) True AMCG00019215
TU40199 other upstream 4542190 8345455 ~ 8384592 (+) True G32130
TU41554 other downstream 1510919 14439253 ~ 14486706 (+) True G33159
TU41707 other downstream 2236014 15164348 ~ 15169841 (+) True G33283
TU41862 other downstream 3115608 16043942 ~ 16081943 (+) True G33406
TU42780 other downstream 7679140 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 7679140 20607474 ~ 20610889 (+) True G34170

Expression Profile