RNA id: AMCG00019353



Basic Information


Item Value
RNA id AMCG00019353
length 243
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00019353
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15929875 ~ 16130440 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTACATGCTTGAAAATATTTCCTGCAGCAGCCACGCCAGAGCCACGTTGGGCCGCTGTGTCATGGCCCGCAGCTGCTTCCGGGCCATTTTGAGGGGGCCCTCTTTGTCAGCGAGGGCCTTCTTCAGAGCCTCGATGTTCTTCTCCTTGGTTGCTGATCTCATCCACCTGCCAGGACACAGAAAAAGTACCCCTAAAAGGCAGCTGATGACCTCTCAAGACATATTTTCAGCTGGGgtttGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU41764 lncRNA upstream 302920 15554819 ~ 15626955 (+) True AMCG00019345
TU41737 lncRNA upstream 396679 15484078 ~ 15533196 (+) True G33307
TU41557 lncRNA upstream 1437669 14491892 ~ 14492206 (+) True G33161
TU41546 lncRNA upstream 1643859 14285565 ~ 14286016 (+) True G33153
TU41531 lncRNA upstream 1769172 14152802 ~ 14160703 (+) True G33141
TU41880 lncRNA downstream 235674 16366114 ~ 16366342 (+) True G33422
TU41906 lncRNA downstream 358431 16488871 ~ 16491053 (+) True G33444
TU41910 lncRNA downstream 366401 16496841 ~ 16504076 (+) True G33448
TU41941 lncRNA downstream 667709 16798149 ~ 16800927 (+) True G33474
TU41992 lncRNA downstream 927146 17057586 ~ 17058220 (+) True G33521
AMCG00019350 mRNA upstream 224795 15693042 ~ 15705080 (+) True AMCG00019350
AMCG00019346 mRNA upstream 241026 15681904 ~ 15688849 (+) True AMCG00019346
AMCG00019345 mRNA upstream 303980 15605867 ~ 15625895 (+) False AMCG00019345
AMCG00019344 mRNA upstream 348861 15566655 ~ 15581014 (+) True AMCG00019344
AMCG00019347 mRNA upstream 399964 15520426 ~ 15529911 (+) True AMCG00019347
AMCG00019354 mRNA downstream 109942 16240382 ~ 16266099 (+) True AMCG00019354
AMCG00019365 mRNA downstream 363027 16493467 ~ 16856282 (+) True AMCG00019365
AMCG00019361 mRNA downstream 913656 17044096 ~ 17050175 (+) True AMCG00019361
AMCG00019368 mRNA downstream 945230 17075670 ~ 17078562 (+) True AMCG00019368
AMCG00019367 mRNA downstream 959629 17090069 ~ 17091118 (+) True AMCG00019367
TU41707 other upstream 760034 15164348 ~ 15169841 (+) True G33283
TU41554 other upstream 1443169 14439253 ~ 14486706 (+) True G33159
TU40734 other upstream 5520378 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 6301213 9369898 ~ 9628662 (+) True G32293
TU40432 other upstream 6581056 9329479 ~ 9348819 (+) True AMCG00019215
TU42780 other downstream 4477034 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 4477034 20607474 ~ 20610889 (+) True G34170
TU42785 other downstream 4477034 20607474 ~ 20610889 (+) False G34170
TU43058 other downstream 6485183 22615623 ~ 22625205 (+) False AMCG00019475
TU43194 other downstream 7541685 23672125 ~ 23695801 (+) True G34511

Expression Profile