RNA id: AMCG00019366


Basic Information

Item Value
RNA id AMCG00019366
length 345
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00019366
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 16955890 ~ 16976970 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCCAGTGCAAGGTTCTGAAGCAGCTTGAGAACTTGGAGCAGCAGAAATATGATGATGAGGACATCTCTGATGACATTAAGTTCCTCTTGGAGAAGCTGGGTGAAAGTGTTCAAGACTTGAGGATCTTGACCAGGCTGCTTGAGGTCTCTGATGACCCCCAGGTGATAGCAGTTGCAGCACATGATGTCGGAGAATATGTGAGACACTATCCTAGGGGCAAACGAGTTATTGAGCAGCTGGGTGGAAAGCAGTTAGTGATGAACCACATGCACCACGAGGATCAGCAGGTCCGCTACAATGCCCTGCTGGCTGTGCAAAAGCTCATGGTGCACAACTGGtaa

Function

GO: NA

KEGG:

id description
K02144 ATPeV1H; V-type H+-transporting ATPase subunit H

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU41928 lncRNA downstream 337199 16618302 ~ 16618691 (-) True G33461
TU41877 lncRNA downstream 644024 16272067 ~ 16311866 (-) True G33419
TU41846 lncRNA downstream 1024682 15858177 ~ 15931208 (-) False G33393
TU41848 lncRNA downstream 1024682 15928445 ~ 15931208 (-) True G33393
TU41716 lncRNA downstream 1699867 15254032 ~ 15256023 (-) True G33291
TU42002 lncRNA upstream 67048 17044018 ~ 17044239 (-) True G33531
TU42003 lncRNA upstream 72544 17049514 ~ 17049746 (-) True G33532
TU42004 lncRNA upstream 73027 17049997 ~ 17054332 (-) True G33533
TU42060 lncRNA upstream 326488 17303458 ~ 17303696 (-) True G33579
TU42065 lncRNA upstream 336369 17313339 ~ 17315430 (-) True G33584
AMCG00019360 mRNA downstream 56823 16891738 ~ 16899067 (-) True AMCG00019360
AMCG00019359 mRNA downstream 112323 16791895 ~ 16843567 (-) True AMCG00019359
AMCG00019358 mRNA downstream 195449 16716365 ~ 16760441 (-) True AMCG00019358
AMCG00019357 mRNA downstream 403665 16507638 ~ 16552225 (-) True AMCG00019357
AMCG00019355 mRNA downstream 481545 16454740 ~ 16474345 (-) True AMCG00019355
AMCG00019363 mRNA upstream 10671 16987641 ~ 17006138 (-) True AMCG00019363
AMCG00019364 mRNA upstream 79002 17055972 ~ 17064681 (-) True AMCG00019364
AMCG00019362 mRNA upstream 91668 17068638 ~ 17075185 (-) True AMCG00019362
AMCG00019372 mRNA upstream 349621 17326591 ~ 17345515 (-) True AMCG00019372
AMCG00019380 mRNA upstream 437236 17414206 ~ 17421484 (-) True AMCG00019380
TU41832 other downstream 1234438 15692482 ~ 15721452 (-) True G33381
TU41680 other downstream 1963894 14951842 ~ 14991996 (-) True G33259
TU41560 other downstream 2397600 14491891 ~ 14558290 (-) False G33163
TU41559 other downstream 2463672 14491891 ~ 14492218 (-) True G33163
TU41485 other downstream 3290660 13662116 ~ 13665230 (-) True G33106
TU42573 other upstream 2465425 19442395 ~ 19448573 (-) True AMCG00019419
TU42823 other upstream 3766560 20743530 ~ 20765496 (-) True AMCG00019446
TU43148 other upstream 6170891 23147861 ~ 23199608 (-) True G34470
TU43838 other upstream 12541026 29517996 ~ 29521984 (-) True G35067
TU43847 other upstream 12568261 29545231 ~ 29550162 (-) False AMCG00019556

Expression Profile