RNA id: AMCG00019419


Basic Information

Item Value
RNA id AMCG00019419
length 669
RNA type mRNA
GC content 0.46
exon number 6
gene id AMCG00019419
representative False

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 19442395 ~ 19454969 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATTCACATCTTTTGCCCCTACCTGAATCACATAAAGAGGCCTTCCTTCGAAAGACTGGCCGATGGAGAACAAGTCAATCAGGCATTGCAGTCATACCAATATGACCCTTTAATGAGAAGACTGATGAATCAGCTGTATTTCTACATAAtgcctgtttttaatgttgatgGCTACCATTTCAGCTGGACAACgGATCGATTCTGGAGGAAAACTAGatctaaaaatgcaaaatattactGCCGTGGTGTAGACGCCAACAGGAACTGGAAAGTAAAGTGGTGTGAATCCGAGCCGGAGGTGAAGGCTGTTGCCAACTTCCTGCGCAAACAGAGGAGGCGTGTGAAAGCCTACATTTCCATCCACGCCTATGCCCAAATGCTGCTCTACCCTTACTCCTACAAATATGACACCATTCCCAATTTCAGCTGTGTTgAATCAGCAGCTCACAATGCTGTTGCTGCCCTTTACTCTGCATATGatgTGAGTTCTGGCAGTTCTATGGACTGGGCCTACAAAAACGGCATCCCCTATGCCTTCGCGTTCGAGTTGCGTGACACCGGCTATTTTGGATTCCTCCTCCCAGAGTCTCTGATTAATCCGACATGTACTGAGACCACTCAGGCTGTCAAAACCATCTCCTTGAGCCTGCTGAAGAAGTGTTCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42512 lncRNA downstream 142922 19294812 ~ 19301547 (-) False AMCG00019417
TU42513 lncRNA downstream 142922 19294812 ~ 19301547 (-) True AMCG00019417
TU42514 lncRNA downstream 142922 19294812 ~ 19301547 (-) False AMCG00019417
TU42360 lncRNA downstream 829215 18606141 ~ 18615254 (-) True G33830
TU42333 lncRNA downstream 1057471 18384952 ~ 18386998 (-) False AMCG00019396
TU42577 lncRNA upstream 12107 19467076 ~ 19480968 (-) True G34006
TU42753 lncRNA upstream 1023288 20478257 ~ 20549700 (-) True G34148
TU42915 lncRNA upstream 1982946 21437915 ~ 21438156 (-) True G34277
TU42921 lncRNA upstream 2091239 21546208 ~ 21546524 (-) True G34283
TU43098 lncRNA upstream 3252976 22707945 ~ 22719120 (-) False AMCG00019487
AMCG00019420 mRNA downstream 44414 19367972 ~ 19400055 (-) True AMCG00019420
AMCG00019421 mRNA downstream 104787 19332001 ~ 19339682 (-) True AMCG00019421
AMCG00019418 mRNA downstream 120996 19317703 ~ 19323473 (-) True AMCG00019418
AMCG00019416 mRNA downstream 136496 19306435 ~ 19307973 (-) True AMCG00019416
AMCG00019417 mRNA downstream 143234 19294812 ~ 19301235 (-) False AMCG00019417
AMCG00019429 mRNA upstream 426760 19881729 ~ 19895839 (-) True AMCG00019429
AMCG00019430 mRNA upstream 459050 19914019 ~ 19918646 (-) True AMCG00019430
AMCG00019431 mRNA upstream 507053 19962022 ~ 19969808 (-) True AMCG00019431
AMCG00019432 mRNA upstream 518331 19973300 ~ 20015967 (-) True AMCG00019432
AMCG00019437 mRNA upstream 616810 20071779 ~ 20096454 (-) True AMCG00019437
TU41832 other downstream 3723017 15692482 ~ 15721452 (-) True G33381
TU41680 other downstream 4452473 14951842 ~ 14991996 (-) True G33259
TU41560 other downstream 4886179 14491891 ~ 14558290 (-) False G33163
TU41559 other downstream 4952251 14491891 ~ 14492218 (-) True G33163
TU41485 other downstream 5779239 13662116 ~ 13665230 (-) True G33106
TU42823 other upstream 1288561 20743530 ~ 20765496 (-) True AMCG00019446
TU43148 other upstream 3692892 23147861 ~ 23199608 (-) True G34470
TU43838 other upstream 10063027 29517996 ~ 29521984 (-) True G35067
TU43847 other upstream 10090262 29545231 ~ 29550162 (-) False AMCG00019556
TU43875 other upstream 10183597 29638566 ~ 29645963 (-) False AMCG00019554

Expression Profile