RNA id: AMCG00019515


Basic Information

Item Value
RNA id AMCG00019515
length 255
RNA type mRNA
GC content 0.57
exon number 1
gene id AMCG00019515
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 25344822 ~ 25345076 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTGTCATGGCGGCCCTGTGGTGGGTTGCTATGAAAATACAAGAGGGATGGGTAAGTGAGCCCAGGTGTCAGCACACACAAGCTGCCCAGCTCTTCTCAACGCCAGTGTCCCAGTGCATCGCTGTGAGCAGGAGGACACTGAAGGATGGACTCCCTGAAGACAGCTACTCCGAGCTAAGGGAATGGAGCAGCCAGACCATGGGCCTTTTGGGCAACAGTGGTGGCCCTGAGAAGGAGGGGATACGACCTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU43411 lncRNA upstream 223444 25121170 ~ 25121378 (+) True G34704
TU43400 lncRNA upstream 240950 25102389 ~ 25103872 (+) True G34695
TU43323 lncRNA upstream 1016803 24327440 ~ 24328019 (+) True G34632
TU43312 lncRNA upstream 1105009 24239416 ~ 24239813 (+) True G34621
TU43305 lncRNA upstream 1124831 24215877 ~ 24219991 (+) True AMCG00019496
TU43562 lncRNA downstream 906348 26251424 ~ 26326302 (+) False G34834
TU43563 lncRNA downstream 947279 26292355 ~ 26344732 (+) True G34834
TU43568 lncRNA downstream 953445 26298521 ~ 26300352 (+) True G34838
TU43598 lncRNA downstream 1170569 26515645 ~ 26515916 (+) True G34863
TU43634 lncRNA downstream 1773448 27118524 ~ 27156206 (+) True G34893
AMCG00019513 mRNA upstream 1135 25310759 ~ 25343687 (+) True AMCG00019513
AMCG00019514 mRNA upstream 45203 25252179 ~ 25299619 (+) True AMCG00019514
AMCG00019508 mRNA upstream 131110 25169668 ~ 25213712 (+) True AMCG00019508
AMCG00019507 mRNA upstream 281248 25028594 ~ 25063574 (+) True AMCG00019507
AMCG00019506 mRNA upstream 354480 24984428 ~ 24990342 (+) True AMCG00019506
AMCG00019517 mRNA downstream 28870 25373946 ~ 25407885 (+) True AMCG00019517
AMCG00019516 mRNA downstream 96243 25441319 ~ 25466929 (+) True AMCG00019516
AMCG00019519 mRNA downstream 135343 25480419 ~ 25515290 (+) True AMCG00019519
AMCG00019520 mRNA downstream 181155 25526231 ~ 25536916 (+) True AMCG00019520
AMCG00019518 mRNA downstream 194657 25539733 ~ 25559090 (+) True AMCG00019518
TU43194 other upstream 1649021 23672125 ~ 23695801 (+) True G34511
TU43058 other upstream 2719617 22615623 ~ 22625205 (+) False AMCG00019475
TU42780 other upstream 4733933 20607474 ~ 20610889 (+) False G34170
TU43819 other downstream 3955879 29300955 ~ 29304646 (+) False AMCG00019551
TU44375 other downstream 6979324 32324400 ~ 32327276 (+) True AMCG00019609
TU44379 other downstream 6985561 32330637 ~ 32392976 (+) False AMCG00019609
TU44804 other downstream 9495240 34840316 ~ 34851323 (+) True AMCG00019641
TU44996 other downstream 10701414 36046490 ~ 36063845 (+) False AMCG00019662