RNA id: AMCG00019522



Basic Information


Item Value
RNA id AMCG00019522
length 462
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00019522
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 25559830 ~ 25560291 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATAAGCTACTGTTTCTCTTTTGGGCTGTTGTGGTGGATCTCTCTCCATGTCTTCGGCGCTGCTGGTagcagttttttatttgatgGCAATAACGAAATCCACTCGAGCTTCATCCACAGGCGGCTGCGCACCCATGagaagagagagatgcagaaagAGATCCTGTCCATCCTAGGGCTGCCGCACCGACCCAGACCGCATCTGGCGCACGGGAAGTACAACTCGGCCCCGCTGTTCATGCTGGACCTGTATAACACCATCTCAAACGAGGACAGGAACGAGGTGGACGGACTCCTGGACCAGTTCAGACCCGTCTTTACCACCCCGGGCCCCCCTCTGGCCACTTTACAAGACAATACCTTCCTCAACGACGCGGACATGGTGATGAGCTTCGTCAATCTGGGTAAGTCGGCGCTGTCACCGTCCCTATTGATGATAATGTTTCAGTGGGCAGATTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU43456 lncRNA upstream 212102 25342261 ~ 25347728 (+) True G34742
TU43411 lncRNA upstream 438452 25121170 ~ 25121378 (+) True G34704
TU43400 lncRNA upstream 455958 25102389 ~ 25103872 (+) True G34695
TU43323 lncRNA upstream 1231811 24327440 ~ 24328019 (+) True G34632
TU43312 lncRNA upstream 1320017 24239416 ~ 24239813 (+) True G34621
TU43562 lncRNA downstream 691133 26251424 ~ 26326302 (+) False G34834
TU43563 lncRNA downstream 732064 26292355 ~ 26344732 (+) True G34834
TU43568 lncRNA downstream 738230 26298521 ~ 26300352 (+) True G34838
TU43598 lncRNA downstream 955354 26515645 ~ 26515916 (+) True G34863
TU43634 lncRNA downstream 1558233 27118524 ~ 27156206 (+) True G34893
AMCG00019518 mRNA upstream 740 25539733 ~ 25559090 (+) True AMCG00019518
AMCG00019520 mRNA upstream 22914 25526231 ~ 25536916 (+) True AMCG00019520
AMCG00019519 mRNA upstream 44540 25480419 ~ 25515290 (+) True AMCG00019519
AMCG00019516 mRNA upstream 92901 25441319 ~ 25466929 (+) True AMCG00019516
AMCG00019517 mRNA upstream 151945 25373946 ~ 25407885 (+) True AMCG00019517
AMCG00019523 mRNA downstream 27699 25587990 ~ 25601445 (+) True AMCG00019523
AMCG00019526 mRNA downstream 609958 26170249 ~ 26193526 (+) True AMCG00019526
AMCG00019528 mRNA downstream 1289034 26849325 ~ 26857024 (+) True AMCG00019528
AMCG00019531 mRNA downstream 1337376 26897667 ~ 26900729 (+) True AMCG00019531
AMCG00019530 mRNA downstream 1392406 26952697 ~ 26957589 (+) True AMCG00019530
TU43194 other upstream 1864029 23672125 ~ 23695801 (+) True G34511
TU43058 other upstream 2934625 22615623 ~ 22625205 (+) False AMCG00019475
TU42780 other upstream 4948941 20607474 ~ 20610889 (+) False G34170
TU43819 other downstream 3740664 29300955 ~ 29304646 (+) False AMCG00019551
TU44375 other downstream 6764109 32324400 ~ 32327276 (+) True AMCG00019609
TU44379 other downstream 6770346 32330637 ~ 32392976 (+) False AMCG00019609
TU44804 other downstream 9280025 34840316 ~ 34851323 (+) True AMCG00019641
TU44996 other downstream 10486199 36046490 ~ 36063845 (+) False AMCG00019662

Expression Profile