RNA id: AMCG00019572


Basic Information

Item Value
RNA id AMCG00019572
length 336
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00019572
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30473446 ~ 30477047 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACCCAGTATTTCAAAGAGAGCATCAAGTTCATTCATGAATCCAGGTTGAAAAGGGAAGGATGCCTTGTCCATTGGGGCTCTAGGGACTTCTTGGCGGGAGTTTCCCGCAGTGTGACTCTTGTGGTGGCATACATCATGACTGTGACAGACCTGGGCTGGCAGGACGCTCTGTCGGCTGTGCGAGCGGCTCGTCCCTGCGCTGGCCCCAACATCGGCTTCCTCAGGCAGCTGGAAGACTTCGAGAACACGCAAATTGTCCATttCAGGAAATGGCTGAAGGAGAAGTATAAGCAAAACCCATTTAATGATGACGAAGAAATTAAGGTTCTTTTATCC

Function

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU43993 lncRNA downstream 30856 30412198 ~ 30442590 (-) True G35190
TU43951 lncRNA downstream 347116 30081650 ~ 30126330 (-) True G35157
TU43938 lncRNA downstream 625588 29847644 ~ 29847858 (-) True G35145
TU43937 lncRNA downstream 644796 29826657 ~ 29828650 (-) True G35144
TU43922 lncRNA downstream 701254 29771586 ~ 29772192 (-) True G35129
TU44022 lncRNA upstream 30023 30507070 ~ 30520464 (-) True G35214
TU44073 lncRNA upstream 115894 30592941 ~ 30674883 (-) True G35243
TU44140 lncRNA upstream 560077 31037124 ~ 31037337 (-) True G35304
TU44261 lncRNA upstream 930935 31407982 ~ 31410657 (-) True G35397
TU44258 lncRNA upstream 944982 31422029 ~ 31427539 (-) True AMCG00019597
AMCG00019571 mRNA downstream 11246 30448193 ~ 30462200 (-) True AMCG00019571
AMCG00019566 mRNA downstream 288939 30183515 ~ 30184507 (-) True AMCG00019566
AMCG00019563 mRNA downstream 301166 30167515 ~ 30172280 (-) True AMCG00019563
AMCG00019564 mRNA downstream 335285 30136731 ~ 30138161 (-) True AMCG00019564
AMCG00019555 mRNA downstream 688204 29773685 ~ 29785242 (-) True AMCG00019555
AMCG00019573 mRNA upstream 88989 30566036 ~ 30568189 (-) True AMCG00019573
AMCG00019575 mRNA upstream 100130 30577177 ~ 30591280 (-) True AMCG00019575
AMCG00019576 mRNA upstream 151675 30628722 ~ 30629555 (-) True AMCG00019576
AMCG00019581 mRNA upstream 377891 30854938 ~ 30857867 (-) True AMCG00019581
AMCG00019582 mRNA upstream 399204 30876251 ~ 30894784 (-) True AMCG00019582
TU43881 other downstream 788144 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 827483 29638566 ~ 29645963 (-) False AMCG00019554
TU43847 other downstream 923284 29545231 ~ 29550162 (-) False AMCG00019556
TU43838 other downstream 951462 29517996 ~ 29521984 (-) True G35067
TU43148 other downstream 7273838 23147861 ~ 23199608 (-) True G34470
TU44357 other upstream 1745017 32222064 ~ 32233398 (-) True G35476
TU44748 other upstream 4033686 34510733 ~ 34522270 (-) True AMCG00019645
TU44832 other upstream 4577972 35055019 ~ 35055444 (-) True G35867
TU45993 other upstream 12067069 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 12167277 42644324 ~ 42656393 (-) True G36862

Expression Profile