RNA id: AMCG00019576


Basic Information

Item Value
RNA id AMCG00019576
length 399
RNA type mRNA
GC content 0.62
exon number 2
gene id AMCG00019576
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30628722 ~ 30629555 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCGTGGTCAGGCTGGACAGCGAGGACCGCCAGCCCGAAAACAACGGCTTCGTGGCCTCCGAGTCGGCGATCCCCAAACTGCTCTGGGATGTCGACGGATCCGTCCTGCCGTTCCTCGGGGGGTTTGGGAAACACCAGAAACAGCTCGTCCTCCTGACCTGGATCCCGGTTTTATTTCTTGGGTTTAGTCAGTTCTCGGACTATTTTCTGTTGGCCCAGCCCAACAGCACCTGTGTGTACCCGGCGGTGAACGGCACTGGCGGCGCAATGTCCGCGAATGGGTCGCGCCTGCACGTCGGCGGCGAGAACAGCAGCGACGACCCGGGCCACTGCCTGTGCGCCGCCTGGACCTACGAGATGCGCACAGGACTGGTCCAAAATGTGGTGACCAAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU44022 lncRNA downstream 108258 30507070 ~ 30520464 (-) True G35214
TU43993 lncRNA downstream 186132 30412198 ~ 30442590 (-) True G35190
TU43951 lncRNA downstream 502392 30081650 ~ 30126330 (-) True G35157
TU43938 lncRNA downstream 780864 29847644 ~ 29847858 (-) True G35145
TU43937 lncRNA downstream 800072 29826657 ~ 29828650 (-) True G35144
TU44140 lncRNA upstream 407569 31037124 ~ 31037337 (-) True G35304
TU44261 lncRNA upstream 778427 31407982 ~ 31410657 (-) True G35397
TU44258 lncRNA upstream 792474 31422029 ~ 31427539 (-) True AMCG00019597
TU44323 lncRNA upstream 1117070 31746625 ~ 31746866 (-) True G35448
TU44334 lncRNA upstream 1442502 32072057 ~ 32072286 (-) True G35458
AMCG00019575 mRNA downstream 37442 30577177 ~ 30591280 (-) True AMCG00019575
AMCG00019573 mRNA downstream 60533 30566036 ~ 30568189 (-) True AMCG00019573
AMCG00019572 mRNA downstream 151675 30473446 ~ 30477047 (-) True AMCG00019572
AMCG00019571 mRNA downstream 166522 30448193 ~ 30462200 (-) True AMCG00019571
AMCG00019566 mRNA downstream 444215 30183515 ~ 30184507 (-) True AMCG00019566
AMCG00019581 mRNA upstream 225383 30854938 ~ 30857867 (-) True AMCG00019581
AMCG00019582 mRNA upstream 246696 30876251 ~ 30894784 (-) True AMCG00019582
AMCG00019583 mRNA upstream 279309 30908864 ~ 30919174 (-) True AMCG00019583
AMCG00019584 mRNA upstream 318152 30947707 ~ 30979946 (-) True AMCG00019584
AMCG00019585 mRNA upstream 442621 31072176 ~ 31078281 (-) True AMCG00019585
TU43881 other downstream 943420 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 982759 29638566 ~ 29645963 (-) False AMCG00019554
TU43847 other downstream 1078560 29545231 ~ 29550162 (-) False AMCG00019556
TU43838 other downstream 1106738 29517996 ~ 29521984 (-) True G35067
TU43148 other downstream 7429114 23147861 ~ 23199608 (-) True G34470
TU44357 other upstream 1592509 32222064 ~ 32233398 (-) True G35476
TU44748 other upstream 3881178 34510733 ~ 34522270 (-) True AMCG00019645
TU44832 other upstream 4425464 35055019 ~ 35055444 (-) True G35867
TU45993 other upstream 11914561 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 12014769 42644324 ~ 42656393 (-) True G36862

Expression Profile