Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00019615 |
| length | 1339 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | AMCG00019615 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 33034771 ~ 33043805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003406 | retinal pigment epithelium development | biological_process |
| GO:0032438 | melanosome organization | biological_process |
| GO:0046688 | response to copper ion | biological_process |
| GO:0008057 | eye pigment granule organization | biological_process |
| GO:0070986 | left/right axis specification | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0033179 | proton-transporting V-type ATPase, V0 domain | cellular_component |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU44447 | lncRNA | upstream | 59115 | 32975392 ~ 32975656 (+) | True | G35553 |
| TU44419 | lncRNA | upstream | 523822 | 32510681 ~ 32510949 (+) | True | G35527 |
| TU44373 | lncRNA | upstream | 713815 | 32319548 ~ 32320956 (+) | True | G35490 |
| TU44372 | lncRNA | upstream | 717200 | 32310037 ~ 32317571 (+) | True | AMCG00019605 |
| TU44367 | lncRNA | upstream | 728424 | 32297404 ~ 32306347 (+) | True | G35485 |
| TU44478 | lncRNA | downstream | 65195 | 33109000 ~ 33113379 (+) | True | G35578 |
| TU44499 | lncRNA | downstream | 340941 | 33384746 ~ 33385185 (+) | True | G35595 |
| TU44549 | lncRNA | downstream | 544578 | 33588383 ~ 33588587 (+) | True | G35636 |
| TU44574 | lncRNA | downstream | 635318 | 33679123 ~ 33724773 (+) | True | G35658 |
| TU44608 | lncRNA | downstream | 720916 | 33764721 ~ 33764947 (+) | True | G35689 |
| AMCG00019613 | mRNA | upstream | 105579 | 32909002 ~ 32929192 (+) | True | AMCG00019613 |
| AMCG00019609 | mRNA | upstream | 703707 | 32324626 ~ 32331064 (+) | False | AMCG00019609 |
| AMCG00019605 | mRNA | upstream | 717787 | 32310114 ~ 32316984 (+) | False | AMCG00019605 |
| AMCG00019604 | mRNA | upstream | 843785 | 32182079 ~ 32190986 (+) | True | AMCG00019604 |
| AMCG00019603 | mRNA | upstream | 948008 | 32074208 ~ 32086763 (+) | True | AMCG00019603 |
| AMCG00019616 | mRNA | downstream | 22317 | 33066122 ~ 33095201 (+) | True | AMCG00019616 |
| AMCG00019614 | mRNA | downstream | 74327 | 33118132 ~ 33141895 (+) | True | AMCG00019614 |
| AMCG00019619 | mRNA | downstream | 629746 | 33673551 ~ 33694225 (+) | True | AMCG00019619 |
| AMCG00019621 | mRNA | downstream | 650497 | 33694302 ~ 33705462 (+) | True | AMCG00019621 |
| AMCG00019620 | mRNA | downstream | 700731 | 33744536 ~ 33746650 (+) | True | AMCG00019620 |
| TU44379 | other | upstream | 641795 | 32330637 ~ 32392976 (+) | False | AMCG00019609 |
| TU44375 | other | upstream | 707495 | 32324400 ~ 32327276 (+) | True | AMCG00019609 |
| TU43819 | other | upstream | 3730125 | 29300955 ~ 29304646 (+) | False | AMCG00019551 |
| TU43194 | other | upstream | 9338970 | 23672125 ~ 23695801 (+) | True | G34511 |
| TU43058 | other | upstream | 10409566 | 22615623 ~ 22625205 (+) | False | AMCG00019475 |
| TU44804 | other | downstream | 1796511 | 34840316 ~ 34851323 (+) | True | AMCG00019641 |
| TU44996 | other | downstream | 3002685 | 36046490 ~ 36063845 (+) | False | AMCG00019662 |
| TU44999 | other | downstream | 3002685 | 36046490 ~ 36063845 (+) | False | AMCG00019662 |
| TU45071 | other | downstream | 3248541 | 36292346 ~ 36299547 (+) | True | AMCG00019671 |
| TU45249 | other | downstream | 4470182 | 37513987 ~ 37516027 (+) | True | G36212 |
