RNA id: AMCG00019655


Basic Information

Item Value
RNA id AMCG00019655
length 606
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00019655
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 35411492 ~ 35418455 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTCTATACTGTTGGAGAGAGTGGTATAAATCTGCTAATGTGGTCGGCGACTGGTAACCAAGGGAATAAGTGGAACTATGCGAATGTGATCATTTCCAACAACAAGCCTTTTACAGTGGCCTTTGAAGCAGAGGTTGGCGGAGACAGCTGGACTGATATTGCACTGGATGATATTTCATTTACCTCCGAATGTGTAGTTGGAGGGCCAATAACCCCTCAGCCTCCAACCTGCAGCTCCCTGCAGTTCCAGTGCCTTCACGTGTCCGAGTGTATTGCACAGAGCTGGCAGTGTGACGGAGAGGCCGACTGCATAGACGGGTCAGACGAGGAGTCCTGTCCGACTAAAGTCCCTGGCACAGTGCCTCCCCAGGAGATATGTCACGACAACCAGTTCCAGTGCATCCACAAGCAGTGCATTGCCTCTCTGCTCAGGTGTGACGGGGTTCAAGATTGTCCTCAGGGTGAAGATGAATTTAGCTGCCCCATGAAGCTTTGTCTCAATGGCTCTCTGCTGTGTGAAGACACCGGAAGTTGTATTCCTGTCTCCCAGCGCTGCGATGGCTCTGTGAACTGCGCCCTGTTCCAGCCCGATGAATCCAGCTGCTTT

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU44768 lncRNA downstream 760505 34650702 ~ 34650987 (-) True G35810
TU44761 lncRNA downstream 761261 34645135 ~ 34650231 (-) True G35803
TU44747 lncRNA downstream 833020 34506033 ~ 34578472 (-) True G35792
TU44749 lncRNA downstream 891361 34510733 ~ 34520131 (-) False AMCG00019645
TU44672 lncRNA downstream 1348358 34060075 ~ 34063134 (-) True G35735
TU44973 lncRNA upstream 516341 35934796 ~ 35935181 (-) False AMCG00019665
TU45001 lncRNA upstream 636024 36054479 ~ 36061297 (-) True G36016
TU45034 lncRNA upstream 749511 36167966 ~ 36168171 (-) True G36038
TU45080 lncRNA upstream 980957 36399412 ~ 36399659 (-) True G36074
TU45086 lncRNA upstream 1119232 36537687 ~ 36537903 (-) True G36080
AMCG00019652 mRNA downstream 248783 35148458 ~ 35162709 (-) True AMCG00019652
AMCG00019650 mRNA downstream 328752 35082313 ~ 35082740 (-) True AMCG00019650
AMCG00019649 mRNA downstream 330475 35066863 ~ 35081017 (-) True AMCG00019649
AMCG00019647 mRNA downstream 428805 34972810 ~ 34982687 (-) True AMCG00019647
AMCG00019648 mRNA downstream 473660 34892466 ~ 34937832 (-) True AMCG00019648
AMCG00019656 mRNA upstream 59295 35477750 ~ 35542868 (-) True AMCG00019656
AMCG00019659 mRNA upstream 182917 35601372 ~ 35602677 (-) True AMCG00019659
AMCG00019658 mRNA upstream 184928 35603383 ~ 35603789 (-) True AMCG00019658
AMCG00019657 mRNA upstream 189192 35607647 ~ 35690658 (-) True AMCG00019657
AMCG00019654 mRNA upstream 277984 35696439 ~ 35714734 (-) True AMCG00019654
TU44832 other downstream 356048 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 889222 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 3178094 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 5726190 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 5765529 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 7125661 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 7225869 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 7879776 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 8158854 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 9478044 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile