RNA id: AMCG00019659



Basic Information


Item Value
RNA id AMCG00019659
length 699
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00019659
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 35601372 ~ 35602677 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCGAGAGACTTCTTCTATTTAggatttttgctttgttctctCACATCTTCCCACAgAGAGTGCGACTTTGAGAATGGGAACTGTGGCTTTTCTCAGGAAGTCAGTGATGAAGACTTTGACTGGCACCTGGGATCGGGATCAAGGAACCCCTTCGGTCCCCTGATCGATCACAGCTATGGGACTGAATATGGCCACTATGTGTATTTTGCCACACCATCTCCTGTGCTATCAATAGTCACGGCTCGCTACATCAGCCCAGTATACCCACCTTCAACCTATTGCTTAACGTTTTGGTACTTCATGTTCGGCAGTGGTGTGAGATCCCTGAAGGTGTATGAACAGATGCACCAGGTTCTCCCACAGACCGTGTGGAGCACTGAGGGAAGCCAGCAGGAAGAATGGCACGCCGCCCAGGCTGATATTTACAGCCCTGCTCCATTTCAGTTTACATTCGAGGGAAGCATTGGAAACGATGTGCAGAGTGTCATTGCCATCGATGACATCCATCTTGTGGAAGGGCCTTGCCTCCCTTTAGGATATTGTGACTTTGAAGATGACTCCTGCGCCTGGAAGAACGTCGTAGAGTTTGATCAGTTTGACTGGCAGAGACGGAGTGCCTCTTCACAGTCTGAAGCCTCGGAGCCAGAGACTGACCACACTCTAGGAACAGCATTCGGttggtattttatattataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44768 lncRNA downstream 950385 34650702 ~ 34650987 (-) True G35810
TU44761 lncRNA downstream 951141 34645135 ~ 34650231 (-) True G35803
TU44747 lncRNA downstream 1022900 34506033 ~ 34578472 (-) True G35792
TU44749 lncRNA downstream 1081241 34510733 ~ 34520131 (-) False AMCG00019645
TU44672 lncRNA downstream 1538238 34060075 ~ 34063134 (-) True G35735
TU44973 lncRNA upstream 332119 35934796 ~ 35935181 (-) False AMCG00019665
TU45001 lncRNA upstream 451802 36054479 ~ 36061297 (-) True G36016
TU45034 lncRNA upstream 565289 36167966 ~ 36168171 (-) True G36038
TU45080 lncRNA upstream 796735 36399412 ~ 36399659 (-) True G36074
TU45086 lncRNA upstream 935010 36537687 ~ 36537903 (-) True G36080
AMCG00019656 mRNA downstream 58504 35477750 ~ 35542868 (-) True AMCG00019656
AMCG00019655 mRNA downstream 182917 35411492 ~ 35418455 (-) True AMCG00019655
AMCG00019652 mRNA downstream 438663 35148458 ~ 35162709 (-) True AMCG00019652
AMCG00019650 mRNA downstream 518632 35082313 ~ 35082740 (-) True AMCG00019650
AMCG00019649 mRNA downstream 520355 35066863 ~ 35081017 (-) True AMCG00019649
AMCG00019658 mRNA upstream 706 35603383 ~ 35603789 (-) True AMCG00019658
AMCG00019657 mRNA upstream 4970 35607647 ~ 35690658 (-) True AMCG00019657
AMCG00019654 mRNA upstream 93762 35696439 ~ 35714734 (-) True AMCG00019654
AMCG00019661 mRNA upstream 140190 35742867 ~ 35763241 (-) True AMCG00019661
AMCG00019666 mRNA upstream 293177 35895854 ~ 35902777 (-) True AMCG00019666
TU44832 other downstream 545928 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 1079102 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 3367974 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 5916070 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 5955409 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 6941439 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 7041647 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 7695554 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 7974632 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 9293822 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile