RNA id: AMCG00019674


Basic Information

Item Value
RNA id AMCG00019674
length 372
RNA type mRNA
GC content 0.54
exon number 6
gene id AMCG00019674
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 36645367 ~ 36715736 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGGATTTCAACAAGGCAACCCAACAATGCATTCCTTTTGGAGGACGGCTTGTGCTGTGAGGTGGTTGATGGCAGAGGAATTGGAGATGGACTCCTCTGTAGGATACCTACCACGCCACAGCCACAGCCacgagaggaggaggagcaggagactGATCCCAACTggTCTGTAGTGTTCCCCTCCTCCAAGGTGCCACTGCAGTTTAAGATCCCAAACAGCCTGAGAATAGAGAGAGTAACCACAAGCAGGGATGACAGCTTGGACAGAAGAGAGGTAGCACATCTGTCCAACGACAAGGAGGGGACGCTGTGGGAGCGCCAAGCCACTGTCAGCACCGCTGTCACAGCTGGCACTGTGGACAAGCAGtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45088 lncRNA downstream 78103 36566929 ~ 36567264 (-) True G36082
TU45086 lncRNA downstream 107464 36537687 ~ 36537903 (-) True G36080
TU45080 lncRNA downstream 245708 36399412 ~ 36399659 (-) True G36074
TU45034 lncRNA downstream 477196 36167966 ~ 36168171 (-) True G36038
TU45001 lncRNA downstream 584070 36054479 ~ 36061297 (-) True G36016
TU45099 lncRNA upstream 43294 36759030 ~ 36759351 (-) True G36093
TU45101 lncRNA upstream 195890 36911626 ~ 36911979 (-) True G36095
TU45103 lncRNA upstream 205847 36921583 ~ 36921806 (-) True G36097
TU45173 lncRNA upstream 451697 37167433 ~ 37186156 (-) True G36160
TU45188 lncRNA upstream 610062 37325798 ~ 37326994 (-) True G36172
AMCG00019672 mRNA downstream 404986 36217304 ~ 36240381 (-) True AMCG00019672
AMCG00019673 mRNA downstream 428994 36196898 ~ 36216373 (-) True AMCG00019673
AMCG00019668 mRNA downstream 567212 36069584 ~ 36078155 (-) True AMCG00019668
AMCG00019667 mRNA downstream 603250 36021356 ~ 36042117 (-) True AMCG00019667
AMCG00019663 mRNA downstream 630661 35999381 ~ 36014706 (-) True AMCG00019663
AMCG00019675 mRNA upstream 201 36715937 ~ 36742382 (-) True AMCG00019675
AMCG00019678 mRNA upstream 356682 37072418 ~ 37089963 (-) True AMCG00019678
AMCG00019679 mRNA upstream 482520 37198256 ~ 37220428 (-) True AMCG00019679
AMCG00019682 mRNA upstream 523153 37238889 ~ 37309104 (-) True AMCG00019682
AMCG00019685 mRNA upstream 662986 37378722 ~ 37384501 (-) True AMCG00019685
TU44832 other downstream 1589923 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 2123097 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 4411969 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 6960065 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 6999404 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 5828380 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 5928588 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 6582495 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 6861573 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 8180763 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile