RNA id: AMCG00019675


Basic Information

Item Value
RNA id AMCG00019675
length 930
RNA type mRNA
GC content 0.42
exon number 4
gene id AMCG00019675
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 36715937 ~ 36742382 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGGCACAGTAGAACCTCAGCCACAGAGCTATGCCAGGGCCATAAAGTGTTGGGCATACAAAATTACCttccacagcacacacactgcaaaaacaacacGAGATTTTAAGACAGAGGAAAAATCTGGAATGCACTACCTTTATTTTCCAATTCAAGAAGAAATCCTGAAAACACTCATGAAGTACCCAGCTGAAAAAACTGCTGACCTGGACACACTGGAGTTATTCCTGAATATTGATGGGCTACCCCTTTTTAAAAGTTCTGAAAAATGCATGTGGCCGGTTCTTTGTGCTGTCCTGATCGAACCTATTAATATCTTCCCTGTTGTGCTCACATCTGGAAACAAAAAACCCAGATTGGAGTTTAAAGGCAGGAACGTCAAGGTCATATTGAGAAGCATTATCTGCGATGCTCGAGCCCAGGCTTTTGTCAAGAACTCCAAACAGTACTCAGGTTACTATGGTTGTGAGAAGTGTGAACAAAAGGGTGTTTGGTTGAAAAGGGTAACCTATCAAGAAGTTGATGACCTAGTTCTGAATACTGACGATTCAGGAATCAAACACAAGAGGAGCATCAGCATGACAATATACCACTGTGCGAATTGTCCAACAATAGGAATCCACACATTCCCAATTGATTATATACTGGTTGACCTGCAAAACAGCATACCATCTTGCTTTGCAAGAAAACCAAGAGGTCTGGATCAGCTGGAGAGATGTAAGTTGACAGAATTTAGACAGTTCCTGCTTTACACAGGGAAACTGATTTCGTTGGGAATCCTTAGCAAGGACCTTTACCAgcactttcttgttttcagtgttgCAATGTGCTTCCTGGTTTCCCCTTCCCTGTTTAGTCAACAAGCAACTTATGCTCAAGATACATTTTGGCAAAGGGACGTAGATTGTACAGAGAAGAATTcctaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45088 lncRNA downstream 148673 36566929 ~ 36567264 (-) True G36082
TU45086 lncRNA downstream 178034 36537687 ~ 36537903 (-) True G36080
TU45080 lncRNA downstream 316278 36399412 ~ 36399659 (-) True G36074
TU45034 lncRNA downstream 547766 36167966 ~ 36168171 (-) True G36038
TU45001 lncRNA downstream 654640 36054479 ~ 36061297 (-) True G36016
TU45099 lncRNA upstream 16648 36759030 ~ 36759351 (-) True G36093
TU45101 lncRNA upstream 169244 36911626 ~ 36911979 (-) True G36095
TU45103 lncRNA upstream 179201 36921583 ~ 36921806 (-) True G36097
TU45173 lncRNA upstream 425051 37167433 ~ 37186156 (-) True G36160
TU45188 lncRNA upstream 583416 37325798 ~ 37326994 (-) True G36172
AMCG00019674 mRNA downstream 201 36645367 ~ 36715736 (-) True AMCG00019674
AMCG00019672 mRNA downstream 475556 36217304 ~ 36240381 (-) True AMCG00019672
AMCG00019673 mRNA downstream 499564 36196898 ~ 36216373 (-) True AMCG00019673
AMCG00019668 mRNA downstream 637782 36069584 ~ 36078155 (-) True AMCG00019668
AMCG00019667 mRNA downstream 673820 36021356 ~ 36042117 (-) True AMCG00019667
AMCG00019678 mRNA upstream 330036 37072418 ~ 37089963 (-) True AMCG00019678
AMCG00019679 mRNA upstream 455874 37198256 ~ 37220428 (-) True AMCG00019679
AMCG00019682 mRNA upstream 496507 37238889 ~ 37309104 (-) True AMCG00019682
AMCG00019685 mRNA upstream 636340 37378722 ~ 37384501 (-) True AMCG00019685
AMCG00019687 mRNA upstream 648924 37391306 ~ 37398627 (-) True AMCG00019687
TU44832 other downstream 1660493 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 2193667 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 4482539 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 7030635 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 7069974 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 5801734 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 5901942 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 6555849 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 6834927 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 8154117 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile