RNA id: AMCG00019688


Basic Information

Item Value
RNA id AMCG00019688
length 315
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00019688
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37491236 ~ 37492869 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAACAGACTGTAGACACAAAGAAAGACCATGAAGCAACAGTTCACGGTTCTCATTACAATGTGGCTGAGCATCTAAGCCGCGATGGGGGAGATGGCTCTCATCTTCATCAGGAGGCTGACAAGTCAGTGCTACAGCTGTACCACTCTCTACAGCAGATACtactggagctggggctgccaGAGACTAGAGACCGCACAACACCACGAGCTTTGACAACAACTGAACTGGCGATCTGTGTTCTGTCCTCACCTGATAAATACCTCCCTGTTCTCTTGGAAGGTGGCAGGCTCTGTTCTGgcgcaaatgaataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45206 lncRNA downstream 119108 37369106 ~ 37372128 (-) True G36184
TU45188 lncRNA downstream 164242 37325798 ~ 37326994 (-) True G36172
TU45173 lncRNA downstream 305080 37167433 ~ 37186156 (-) True G36160
TU45103 lncRNA downstream 569430 36921583 ~ 36921806 (-) True G36097
TU45101 lncRNA downstream 579257 36911626 ~ 36911979 (-) True G36095
TU45330 lncRNA upstream 245406 37738275 ~ 37740601 (-) True G36267
TU45347 lncRNA upstream 480584 37973453 ~ 37973683 (-) True G36284
TU45373 lncRNA upstream 494374 37987243 ~ 38109937 (-) False AMCG00019698
TU45375 lncRNA upstream 494374 37987243 ~ 38110207 (-) True AMCG00019698
TU45374 lncRNA upstream 558344 38051213 ~ 38109937 (-) False AMCG00019698
AMCG00019686 mRNA downstream 2094 37458093 ~ 37489142 (-) True AMCG00019686
AMCG00019683 mRNA downstream 66118 37421416 ~ 37425118 (-) True AMCG00019683
AMCG00019687 mRNA downstream 92609 37391306 ~ 37398627 (-) True AMCG00019687
AMCG00019685 mRNA downstream 106735 37378722 ~ 37384501 (-) True AMCG00019685
AMCG00019682 mRNA downstream 182132 37238889 ~ 37309104 (-) True AMCG00019682
AMCG00019684 mRNA upstream 72401 37565270 ~ 37590061 (-) True AMCG00019684
AMCG00019692 mRNA upstream 248640 37741509 ~ 37745656 (-) True AMCG00019692
AMCG00019698 mRNA upstream 396575 37889444 ~ 38110224 (-) False AMCG00019698
AMCG00019701 mRNA upstream 715013 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019703 mRNA upstream 770023 38262892 ~ 38263670 (-) True AMCG00019703
TU44832 other downstream 2435792 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 2968966 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 5257838 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 7805934 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 7845273 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 5051247 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 5151455 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 5805362 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 6084440 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 7403630 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile