RNA id: AMCG00019698


Basic Information

Item Value
RNA id AMCG00019698
length 936
RNA type mRNA
GC content 0.57
exon number 8
gene id AMCG00019698
representative False

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37889444 ~ 38110224 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCAATTACTCCGCGTCGGTCAAGCAGGTCTATGGCACCGTATTCAACAGTTGCTCCGGCGTTTGTTGCGCACCGCACTCATTTTGCGCACATGGAAGTACGCCGACATGCACGAAACGAGCGATTGTAGGACGTAACGGGACGTATACAGACCTGCTCCCGTCGAGGCGTGCAGCGCGCATAAACCCAAAGCAGCGCAACGAAGCGCAGCCGTGCAGCCCCGGCTCTGATCTCACCCGCGCCGTGACGTCACGCGCGGTCCGTGAGGTAGCAGAGCGTTCCGCGCAGCGCGTGCTCCGAGCACATGGAAAGAGGTCGCGCCGAGCCGAGCCGCGCGCGGGGCTGCGTTCATGTCACTTTCTGCGGCTTTTCCACCGCTTACCTGGGATATAAACGCCGCAGCGAGATGTGGGACAAGTCGAAGAAAGGaaTGTCACAAAGCATTCTGAAGGGCATGCAGCACTTGACTGCCTATAAATCTGTTTGGCGGGTGATCTACCGCCCATACGCCAGCTGCTCTCCTGGCACATCTAGCGTTGCTGTTGCTATGGAGACACCGAGGCAGACGAGTGACATGCAGGCCCCTGGCTCAGTGCCAAGTTGCCATGGAGAGGACATGGTGGGCCAAGATCCCAATGGTAGTCAAAAACAGattCCCCAACTGCTGCCGAGAATGCCCCTGGACTTCAACTCTGCGCCACTGTCATCGGGGGAGATGTCCAACCTCAGAAGAGAACAGCTGCTGTCAGGAGGGGATCTTATTATAAGATCCAGGAAGAGCCTCTGTGCCAGTAGGAGGTCAGATCAGCAACTCAGCCTCCAGACCACCGCTGCAGCCCTGAGTAACGACACAGCAGACAGACAACCGGAGAACAGCCAAGAAGAcagacaATTCCAAGGCTGTGGTTTACAGCAAGCTTCGGACAGAGttaaataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45330 lncRNA downstream 148843 37738275 ~ 37740601 (-) True G36267
TU45206 lncRNA downstream 517316 37369106 ~ 37372128 (-) True G36184
TU45188 lncRNA downstream 562450 37325798 ~ 37326994 (-) True G36172
TU45173 lncRNA downstream 703288 37167433 ~ 37186156 (-) True G36160
TU45103 lncRNA downstream 967638 36921583 ~ 36921806 (-) True G36097
TU45387 lncRNA upstream 8496 38118720 ~ 38118934 (-) True G36312
TU45429 lncRNA upstream 343800 38454024 ~ 38454309 (-) True G36349
TU45501 lncRNA upstream 508617 38618841 ~ 38619657 (-) True G36386
TU45585 lncRNA upstream 968279 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 1135568 39245792 ~ 39293373 (-) True G36470
AMCG00019692 mRNA downstream 143788 37741509 ~ 37745656 (-) True AMCG00019692
AMCG00019684 mRNA downstream 299383 37565270 ~ 37590061 (-) True AMCG00019684
AMCG00019688 mRNA downstream 396575 37491236 ~ 37492869 (-) True AMCG00019688
AMCG00019686 mRNA downstream 400302 37458093 ~ 37489142 (-) True AMCG00019686
AMCG00019683 mRNA downstream 464326 37421416 ~ 37425118 (-) True AMCG00019683
AMCG00019701 mRNA upstream 97658 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019703 mRNA upstream 152668 38262892 ~ 38263670 (-) True AMCG00019703
AMCG00019702 mRNA upstream 156130 38266354 ~ 38269323 (-) True AMCG00019702
AMCG00019704 mRNA upstream 232748 38342972 ~ 38350616 (-) True AMCG00019704
AMCG00019705 mRNA upstream 516050 38626274 ~ 38626804 (-) True AMCG00019705
TU44832 other downstream 2834000 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 3367174 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 5656046 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 8204142 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 8243481 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 4433892 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 4534100 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 5188007 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 5467085 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 6786275 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile