RNA id: AMCG00019702


Basic Information

Item Value
RNA id AMCG00019702
length 513
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00019702
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38266354 ~ 38269323 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTACATAGAAATCCCCAAATTGTACACAGAAACAAGAAATGTACTGAATCACCAACTTGCAGGGAAACCATTTTACTCAGGCACAACAGATTTATGGACCAGCAGAGCAGCAGACATGTTTATGGCTGTAACTCTCCAGTTCATCACTGAGTCTTGGGACATGCAAGCCTGGTGCTTGGGCTGTGCTGGGCTTAACATTGATCATACAGCGGAGAGTCTGAGGGAGGCACTGGAGCAGCTCATTGTATATACATGGAGTTTGGACATGTCCAAAATGGCTGCATCCAAAGCCATTCTTATGGCAAAAGGCCTCCAGAGGATCACGACTAGGAGACAGAGGACACCCTCCATCCATGAGCCAATCCAGAAATTGGTTGACTGCTTGGCCATTCAGCTCAACAGGCACTTTGGCATGTGGAGTTTAATGGGAGATTGGCAGATGCAAGCCTTTTGGACCCTGGGTTCAAAAAGCAGGCATTTGTTAACATCCAAGCAGGGGATGAAGCTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45387 lncRNA downstream 147420 38118720 ~ 38118934 (-) True G36312
TU45375 lncRNA downstream 156147 37987243 ~ 38110207 (-) True AMCG00019698
TU45429 lncRNA upstream 184701 38454024 ~ 38454309 (-) True G36349
TU45501 lncRNA upstream 349518 38618841 ~ 38619657 (-) True G36386
TU45585 lncRNA upstream 809180 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 976469 39245792 ~ 39293373 (-) True G36470
TU45630 lncRNA upstream 1110485 39379808 ~ 39380708 (-) True G36495
AMCG00019703 mRNA downstream 2684 38262892 ~ 38263670 (-) True AMCG00019703
AMCG00019701 mRNA downstream 43565 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019698 mRNA downstream 156130 37889444 ~ 38110224 (-) False AMCG00019698
AMCG00019692 mRNA downstream 520698 37741509 ~ 37745656 (-) True AMCG00019692
AMCG00019684 mRNA downstream 676293 37565270 ~ 37590061 (-) True AMCG00019684
AMCG00019704 mRNA upstream 73649 38342972 ~ 38350616 (-) True AMCG00019704
AMCG00019705 mRNA upstream 356951 38626274 ~ 38626804 (-) True AMCG00019705
AMCG00019706 mRNA upstream 498838 38768161 ~ 38775844 (-) True AMCG00019706
AMCG00019707 mRNA upstream 547176 38816499 ~ 38819280 (-) True AMCG00019707
AMCG00019712 mRNA upstream 572819 38842142 ~ 38865670 (-) True AMCG00019712
TU44832 other downstream 3210910 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 3744084 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 6032956 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 8581052 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 8620391 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 4274793 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 4375001 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 5028908 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 5307986 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 6627176 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile