RNA id: AMCG00019703



Basic Information


Item Value
RNA id AMCG00019703
length 321
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00019703
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38262892 ~ 38263670 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCTTTTGCGCCTCCTTTCCACTCAGCGATTGAAAACCACAGTGAAGCCGTCGTGGCTTCAGTGCTGAAGCTGTTCCTCATGGATCTCCCCAAGGCTCTGATTCCGGACCACTCGGGCCTGGCCAACGCCTTCAAAGGAAGTAAAGACAAGGCGGAGCTGAGCAGCTGCCTGCAGGCTGAACTGGACAGTCTGCCGGCAGAGCACCTGCGTCTGCTCAGAAGCCTCGTCCACTTTCTGGTCCGAGTGACATCTTATAGCGAGACCAATAGGATGACAGGGGACTTGGGGAAGGTCTTCGGACCCTGCATATTCCAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45387 lncRNA downstream 143958 38118720 ~ 38118934 (-) True G36312
TU45375 lncRNA downstream 152685 37987243 ~ 38110207 (-) True AMCG00019698
TU45429 lncRNA upstream 190354 38454024 ~ 38454309 (-) True G36349
TU45501 lncRNA upstream 355171 38618841 ~ 38619657 (-) True G36386
TU45585 lncRNA upstream 814833 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 982122 39245792 ~ 39293373 (-) True G36470
TU45630 lncRNA upstream 1116138 39379808 ~ 39380708 (-) True G36495
AMCG00019701 mRNA downstream 40103 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019698 mRNA downstream 152668 37889444 ~ 38110224 (-) False AMCG00019698
AMCG00019692 mRNA downstream 517236 37741509 ~ 37745656 (-) True AMCG00019692
AMCG00019684 mRNA downstream 672831 37565270 ~ 37590061 (-) True AMCG00019684
AMCG00019688 mRNA downstream 770023 37491236 ~ 37492869 (-) True AMCG00019688
AMCG00019702 mRNA upstream 2684 38266354 ~ 38269323 (-) True AMCG00019702
AMCG00019704 mRNA upstream 79302 38342972 ~ 38350616 (-) True AMCG00019704
AMCG00019705 mRNA upstream 362604 38626274 ~ 38626804 (-) True AMCG00019705
AMCG00019706 mRNA upstream 504491 38768161 ~ 38775844 (-) True AMCG00019706
AMCG00019707 mRNA upstream 552829 38816499 ~ 38819280 (-) True AMCG00019707
TU44832 other downstream 3207448 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 3740622 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 6029494 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 8577590 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 8616929 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 4280446 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 4380654 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 5034561 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 5313639 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 6632829 44896499 ~ 44910150 (-) False AMCG00019799