RNA id: AMCG00019705



Basic Information


Item Value
RNA id AMCG00019705
length 297
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00019705
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38626274 ~ 38626804 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGTAACAGCCGACGAGCTCTCCAAATGATCATGGAGGAGCTCTGTGATGTCGACAAGGCCATTGAGTTCGCCAAGGAGCAAGACGACGCTGAGCTATGGGAGGACCTCATCTCCTATTCCATAGACAAGCCACCGTTTATCACAGGCTTGCTGAATAACATTGGAACCCATGTTGACCCTATTCTCCTGATCCACCGCATTAAGGAAGGCATGGAAATCCCCAACCTGAGAGACTCGCTGGTCAAAATCCTGCAGGACTACAATCTGCAAGTAAGTAGAGATGATGTCCATTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45501 lncRNA downstream 6617 38618841 ~ 38619657 (-) True G36386
TU45429 lncRNA downstream 171965 38454024 ~ 38454309 (-) True G36349
TU45387 lncRNA downstream 507340 38118720 ~ 38118934 (-) True G36312
TU45375 lncRNA downstream 516067 37987243 ~ 38110207 (-) True AMCG00019698
TU45585 lncRNA upstream 451699 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 618988 39245792 ~ 39293373 (-) True G36470
TU45630 lncRNA upstream 753004 39379808 ~ 39380708 (-) True G36495
TU45651 lncRNA upstream 790198 39417002 ~ 39417956 (-) False AMCG00019724
TU45676 lncRNA upstream 1079798 39706602 ~ 39709528 (-) True G36534
AMCG00019704 mRNA downstream 275658 38342972 ~ 38350616 (-) True AMCG00019704
AMCG00019702 mRNA downstream 356951 38266354 ~ 38269323 (-) True AMCG00019702
AMCG00019703 mRNA downstream 362604 38262892 ~ 38263670 (-) True AMCG00019703
AMCG00019701 mRNA downstream 403485 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019698 mRNA downstream 516050 37889444 ~ 38110224 (-) False AMCG00019698
AMCG00019706 mRNA upstream 141357 38768161 ~ 38775844 (-) True AMCG00019706
AMCG00019707 mRNA upstream 189695 38816499 ~ 38819280 (-) True AMCG00019707
AMCG00019712 mRNA upstream 215338 38842142 ~ 38865670 (-) True AMCG00019712
AMCG00019711 mRNA upstream 258202 38885006 ~ 38893548 (-) True AMCG00019711
AMCG00019715 mRNA upstream 275999 38902803 ~ 38907186 (-) True AMCG00019715
TU44832 other downstream 3570830 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 4104004 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 6392876 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 8940972 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 8980311 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 3917312 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 4017520 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 4671427 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 4950505 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 6269695 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile