RNA id: AMCG00019713



Basic Information


Item Value
RNA id AMCG00019713
length 363
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00019713
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38980110 ~ 38989131 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGGCCATACATCTCCCAGTTTGTGGACAAGCTGTTCCGGGAGACCATTGAGCCGGCGGTCAAAGGAGCCAATGCTCACTTGAGCACCTTCTGCTTCACCAAGGTGGACATGGGAGACAAGCCCCTGAGGATTAATGGGGTCAAGGTGTACACTGAGAATGTGGACAAAAGACAGATAATCATGGACCTTCAGATAAGctttGTTGGCAACACTGAAATCGATGTTGATATCAAAAGATATTACTGCAGAGCTGGCATCAAGAGCATACAGCTGCATGGAGTCCTGCGAGTGATCATGGAGCCCCTCCTTGGAGACATGCCCCTGATAGGAGCTCTGTCTATCTTCTTCCTTAAGAAACCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45501 lncRNA downstream 360453 38618841 ~ 38619657 (-) True G36386
TU45429 lncRNA downstream 525801 38454024 ~ 38454309 (-) True G36349
TU45387 lncRNA downstream 861176 38118720 ~ 38118934 (-) True G36312
TU45377 lncRNA downstream 870173 38100553 ~ 38109937 (-) False AMCG00019698
TU45585 lncRNA upstream 89372 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 256661 39245792 ~ 39293373 (-) True G36470
TU45630 lncRNA upstream 390677 39379808 ~ 39380708 (-) True G36495
TU45651 lncRNA upstream 427871 39417002 ~ 39417956 (-) False AMCG00019724
TU45676 lncRNA upstream 717471 39706602 ~ 39709528 (-) True G36534
AMCG00019714 mRNA downstream 27097 38929405 ~ 38953013 (-) True AMCG00019714
AMCG00019715 mRNA downstream 72924 38902803 ~ 38907186 (-) True AMCG00019715
AMCG00019711 mRNA downstream 86562 38885006 ~ 38893548 (-) True AMCG00019711
AMCG00019712 mRNA downstream 114440 38842142 ~ 38865670 (-) True AMCG00019712
AMCG00019707 mRNA downstream 160830 38816499 ~ 38819280 (-) True AMCG00019707
AMCG00019719 mRNA upstream 92971 39082102 ~ 39097112 (-) True AMCG00019719
AMCG00019720 mRNA upstream 206363 39195494 ~ 39195833 (-) True AMCG00019720
AMCG00019721 mRNA upstream 374833 39363964 ~ 39370197 (-) True AMCG00019721
AMCG00019724 mRNA upstream 427756 39416887 ~ 39505562 (-) True AMCG00019724
AMCG00019725 mRNA upstream 721856 39710987 ~ 39728290 (-) True AMCG00019725
TU44832 other downstream 3924666 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 4457840 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 6746712 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 9294808 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 9334147 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 3554985 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 3655193 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 4309100 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 4588178 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 5907368 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile