RNA id: AMCG00019721


Basic Information

Item Value
RNA id AMCG00019721
length 651
RNA type mRNA
GC content 0.56
exon number 4
gene id AMCG00019721
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39363964 ~ 39370197 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atgtttttttctttttcttttcagattctACCTGGAGTTCGGATCATCATCGCCAACCCTGAAACCAAAGGGCCCCTGGGAGACTCGCATCTCGGGGAGATCTGGGTGCACAGCGGGCACAATGCCAGCGGCTACTTCACCATCTATGGTGATGAGTCCCTGCAGTCCGACCACTTCAACTCCCGTCTGAGCTTTGGAGACACGCAGACCATCTGGGCCCGGACTGGGTACCTGGGCTTCCTGAGGAGAACAGAGCTGACAGATGCCAGTGGAGAGAGACACGACGCGCTGTATGTAGTAGGAGCGCTAGACGAGGCCATGGAGCTGCGAGGGATGAGATACCATCCCATTGACATCGAGACCTCTGTAATCAGGACACACAAGAGCATCACAGAATGCGCGGTGTTCACCTGGACCAATCTGCTGGTAGTGGTGGTGGAGCTGGACGGCTCGGAGCAGGAAGCGCTGGACCTCGTTCCCCTGGTCACCAACGTCGTCCTGGAGGAGCACTACCTGATcgtgggggtggtggtggtggtggacaTTGGGGTCATCCCCATAAACTCTCGCGGGGAGAAGCAGAGGATGCACCTGCGGGATGGCTTTTTGGCAGACCAGCTAGATCCCATTTACGTGGCCTACAACATGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45604 lncRNA downstream 70591 39245792 ~ 39293373 (-) True G36470
TU45585 lncRNA downstream 281985 39078503 ~ 39081979 (-) True G36456
TU45501 lncRNA downstream 744307 38618841 ~ 38619657 (-) True G36386
TU45429 lncRNA downstream 909655 38454024 ~ 38454309 (-) True G36349
TU45387 lncRNA downstream 1245030 38118720 ~ 38118934 (-) True G36312
TU45630 lncRNA upstream 9611 39379808 ~ 39380708 (-) True G36495
TU45651 lncRNA upstream 46805 39417002 ~ 39417956 (-) False AMCG00019724
TU45676 lncRNA upstream 336405 39706602 ~ 39709528 (-) True G36534
TU45677 lncRNA upstream 336873 39707070 ~ 39709528 (-) False G36534
TU45684 lncRNA upstream 442113 39812310 ~ 39813571 (-) True G36539
AMCG00019720 mRNA downstream 168131 39195494 ~ 39195833 (-) True AMCG00019720
AMCG00019719 mRNA downstream 266852 39082102 ~ 39097112 (-) True AMCG00019719
AMCG00019713 mRNA downstream 374833 38980110 ~ 38989131 (-) True AMCG00019713
AMCG00019714 mRNA downstream 410951 38929405 ~ 38953013 (-) True AMCG00019714
AMCG00019715 mRNA downstream 456778 38902803 ~ 38907186 (-) True AMCG00019715
AMCG00019724 mRNA upstream 46690 39416887 ~ 39505562 (-) True AMCG00019724
AMCG00019725 mRNA upstream 340790 39710987 ~ 39728290 (-) True AMCG00019725
AMCG00019727 mRNA upstream 363192 39733389 ~ 39740243 (-) True AMCG00019727
AMCG00019726 mRNA upstream 456158 39826355 ~ 39830587 (-) True AMCG00019726
AMCG00019731 mRNA upstream 599978 39970175 ~ 40044291 (-) True AMCG00019731
TU44832 other downstream 4308520 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 4841694 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 7130566 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 9678662 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 9718001 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 3173919 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 3274127 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 3928034 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 4207112 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 5526302 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile