RNA id: AMCG00019740


Basic Information

Item Value
RNA id AMCG00019740
length 1353
RNA type mRNA
GC content 0.56
exon number 12
gene id AMCG00019740
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 41691571 ~ 41866477 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTAGAGTTCAGAGttCAGGATCCCACAGATGTCATACACAGATACAAGAAGATCGTGTGtacatacaagaaaataaaagtcaTGACAAAAGCTCTCCGTCGTCACAAGTTGGATAGAAACACTATGGTGTCAACAGCCCCAATAGCAGAGCTTGCCATTGCAGCTCCTGAGAAGTACAAAGAAGCAGTCTATGCCCTCCTCATGAAGACTTCTCGACTTGCGGCGGACAGACTGGCAGGCAGAGACAGTGGAGaggtcccgaccCCGGCCGCGCCCGCTGCCGAATCTAAGATCCCGaagaaattgaaaagaaaaaagaaaaaagtaccTGCTCTAgtcgccgaaccagaggtcccgatcccggccgccgccgaaccagaggtccagAACCAGGTCCCGATTCTagccgccgccgaaccagaggtcccgatccagATCCCGATCCGGGCCGTCGTTGCCGacccagaggtcccgatcccggaCGTCGTTGCCGACCCAGAGGTCCCGATTCCGGTCCTGATCCTGGCCTCCGCTCCCGAATCAGAGGTCCCGATCCCAACAGCCGCCGCCCAACCCGAGTTCCCAGCGGTCGCCGCCTTCATCGCTGCCGCCCAGCCCGAATGCCCAGCGGGTGAATCATCTTCGAGTGACACTGAAGACATCAGGCCTTCAGAGTTTGGTCGGTGGAAAGTCATTCTTTTGCAGGCCGAAGAACCTCGGAGAACACTGGCATCATCCATGATGAAGCTCACTTCTGCGGCACACAGAGAGtCAACAAGAGGCATCAGGCTGCTGAGCTCTGTCTACATATACACAAGGGATGTTAGTCCATGTTTCTCCGGGAGCCAAAAGCAAGGAGGAAGCCGGGGGACACCCAGGCTGGAGACCACTACTTGTGGACATGACAGCGaccCTCAACAGTTCAGTTACCTCATAGTGAACATTGACAACACTATGTCAGCCACCATGGGACACGGAACCCCATTCACACGGAGCCACAATGGACAGATCCACACGAACTTCGAGAGAGGACTTGCGAGAGTTGACAGATCAGGGAGAGTGCCCTGGGTGGCCCACTGGGCCGGTAAGATGACTGGGCGTTGGTCCGGACCGGAGAGGAGGGTTCGGTTGGAGACGCCACCACGATTGGAAGAGTATGCTGTTGCCGGGCAGGGATGGCTTGGTGCCAGCAAGGGGTTTCCAGTACAGACCCTTTTTCAAGGTAAACTCATTCTTGAGTTCACAATGcccttgcccttgcccttgcccttgcccttgcccttgcccttgcccttgccctCCAATGCTGCCAATGTTTCTTTCAGTTGCAAATCCAGTGTGAGGTCTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45818 lncRNA upstream 548997 41142190 ~ 41142574 (+) True G36654
TU45808 lncRNA upstream 820256 40871108 ~ 40871315 (+) True G36644
TU45758 lncRNA upstream 1044884 40646448 ~ 40646687 (+) True G36604
TU45755 lncRNA upstream 1111476 40579888 ~ 40580095 (+) True G36601
TU45752 lncRNA upstream 1201456 40489916 ~ 40490115 (+) True G36598
TU45875 lncRNA downstream 83648 41950125 ~ 41950350 (+) True G36709
TU45882 lncRNA downstream 166538 42033015 ~ 42033516 (+) True G36716
TU45886 lncRNA downstream 170682 42037159 ~ 42037370 (+) True G36720
TU45910 lncRNA downstream 347709 42214186 ~ 42270922 (+) True G36744
TU45920 lncRNA downstream 445071 42311548 ~ 42312172 (+) True G36754
AMCG00019736 mRNA upstream 333356 41348441 ~ 41358215 (+) True AMCG00019736
AMCG00019735 mRNA upstream 356368 41324694 ~ 41335203 (+) True AMCG00019735
AMCG00019737 mRNA upstream 378658 41304834 ~ 41312913 (+) True AMCG00019737
AMCG00019732 mRNA upstream 961905 40718483 ~ 40729666 (+) True AMCG00019732
AMCG00019733 mRNA upstream 988649 40691516 ~ 40702922 (+) True AMCG00019733
AMCG00019742 mRNA downstream 507991 42374468 ~ 42385648 (+) True AMCG00019742
AMCG00019745 mRNA downstream 642125 42508602 ~ 42527208 (+) True AMCG00019745
AMCG00019746 mRNA downstream 678970 42545447 ~ 42552673 (+) True AMCG00019746
AMCG00019747 mRNA downstream 690822 42557299 ~ 42572080 (+) False AMCG00019747
AMCG00019751 mRNA downstream 758253 42624730 ~ 42627105 (+) True AMCG00019751
TU45249 other upstream 4175544 37513987 ~ 37516027 (+) True G36212
TU45071 other upstream 5392024 36292346 ~ 36299547 (+) True AMCG00019671
TU44996 other upstream 5627726 36046490 ~ 36063845 (+) False AMCG00019662
TU44999 other upstream 5627726 36046490 ~ 36063845 (+) False AMCG00019662
TU44804 other upstream 6840248 34840316 ~ 34851323 (+) True AMCG00019641
TU46002 other downstream 690063 42556540 ~ 42558936 (+) True AMCG00019747
TU46131 other downstream 1094179 42960656 ~ 42962658 (+) True AMCG00019755
TU46165 other downstream 1395417 43261894 ~ 43270885 (+) False AMCG00019758
TU46181 other downstream 1463815 43330292 ~ 43333313 (+) True G36954
TU46357 other downstream 2186597 44053074 ~ 44056603 (+) True G37105

Expression Profile