RNA id: AMCG00019769


Basic Information

Item Value
RNA id AMCG00019769
length 324
RNA type mRNA
GC content 0.40
exon number 3
gene id AMCG00019769
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43804160 ~ 43809705 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATgaaggtgtctgctaaaaaacTCAATAATCTATCCATtttgaaggaggaggaggaggaggaggaggaagaggagaggaagaagaattCTgTCTGCCTGCAGCGAACAGGACATTTAAATAAGCAGCGCTGTACGAAAAATGAAGATGCGCATATAAGGGACAATTTCTGGGAGTTATTTAAACTCTTGTTTAAATATGATCCAGAGATTCAAAGTAGGCTTGACGCTATGCCTAAAAACGCCACAATGACCAgccatgaaatacaaaatgatttacTTGATTCTGCAGCAACTCTCCTAGCTGATGAGTGTAAGGACATTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46277 lncRNA downstream 147716 43612364 ~ 43656444 (-) False AMCG00019768
TU46263 lncRNA downstream 247416 43555743 ~ 43556744 (-) True G37021
TU46265 lncRNA downstream 248651 43526407 ~ 43555509 (-) False G37022
TU46264 lncRNA downstream 248651 43551308 ~ 43555509 (-) True G37022
TU46213 lncRNA downstream 470847 43330289 ~ 43333313 (-) True AMCG00019761
TU46292 lncRNA upstream 12629 43822334 ~ 43822820 (-) True G37048
TU46452 lncRNA upstream 599512 44409217 ~ 44410259 (-) True G37171
TU46455 lncRNA upstream 627215 44436920 ~ 44443701 (-) True G37174
TU46528 lncRNA upstream 914069 44723774 ~ 44735394 (-) True G37232
TU46597 lncRNA upstream 1086794 44896499 ~ 44898892 (-) True AMCG00019799
AMCG00019768 mRNA downstream 90383 43577508 ~ 43713777 (-) True AMCG00019768
AMCG00019765 mRNA downstream 240644 43556899 ~ 43563516 (-) True AMCG00019765
AMCG00019763 mRNA downstream 405030 43369896 ~ 43399130 (-) True AMCG00019763
AMCG00019761 mRNA downstream 461454 43332431 ~ 43342706 (-) False AMCG00019761
AMCG00019760 mRNA downstream 521355 43274030 ~ 43282805 (-) True AMCG00019760
AMCG00019771 mRNA upstream 65220 43874925 ~ 43877635 (-) True AMCG00019771
AMCG00019772 mRNA upstream 72843 43882548 ~ 43929432 (-) True AMCG00019772
AMCG00019774 mRNA upstream 236982 44046687 ~ 44056603 (-) True AMCG00019774
AMCG00019776 mRNA upstream 260989 44070694 ~ 44102691 (-) True AMCG00019776
AMCG00019777 mRNA upstream 294791 44104496 ~ 44112240 (-) True AMCG00019777
TU46276 other downstream 147716 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 443254 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 1147767 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 1259636 42544116 ~ 42544524 (-) True G36817
TU44832 other downstream 8748716 35055019 ~ 35055444 (-) True G35867
TU46596 other upstream 1086794 44896499 ~ 44910150 (-) False AMCG00019799
TU46822 other upstream 2555633 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 4082498 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 4712963 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 6901043 50710748 ~ 50712143 (-) True AMCG00019866