RNA id: AMCG00019778


Basic Information

Item Value
RNA id AMCG00019778
length 408
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00019778
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44185532 ~ 44189156 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGGGGCGCGGCGCGGGGGCGCGGATGGGACGCAGCGCGCAGTGGATGCGGATCGCCGgtcgcacacacgcacgcagcTCCTCGGGCTTGTTCAAGGCATCCCTGCGTCTATGCCTGCACTGACGGGCAGCACTGCAACTGCGGGACCCACCGGGAAAACTGCGGGGCTGTACCCTGGGACGTGCGTGATCCTCGTGCAGCTGGTCAGCCAAACCGCCCAGCATGAACCCCCCGTGCGCGCGCTGCGGGAAGATCGTGTACCCCACCGAGAAAGTCAACTGCCTGGACAAGGTAACCCGGAGCGGGactttTACTGGCACAAAGGATGTTTTCACTGTGAGGTGTGCAAAATGACCCTAAACATGAAGAATTACAAAGGATATGAGAAGAAGCCCTATTGCAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46292 lncRNA downstream 362712 43822334 ~ 43822820 (-) True G37048
TU46277 lncRNA downstream 529088 43612364 ~ 43656444 (-) False AMCG00019768
TU46263 lncRNA downstream 628788 43555743 ~ 43556744 (-) True G37021
TU46265 lncRNA downstream 630023 43526407 ~ 43555509 (-) False G37022
TU46452 lncRNA upstream 220061 44409217 ~ 44410259 (-) True G37171
TU46455 lncRNA upstream 247764 44436920 ~ 44443701 (-) True G37174
TU46528 lncRNA upstream 534618 44723774 ~ 44735394 (-) True G37232
TU46597 lncRNA upstream 707343 44896499 ~ 44898892 (-) True AMCG00019799
TU46593 lncRNA upstream 746367 44935523 ~ 44936756 (-) True G37290
AMCG00019777 mRNA downstream 73292 44104496 ~ 44112240 (-) True AMCG00019777
AMCG00019776 mRNA downstream 82841 44070694 ~ 44102691 (-) True AMCG00019776
AMCG00019774 mRNA downstream 128929 44046687 ~ 44056603 (-) True AMCG00019774
AMCG00019772 mRNA downstream 256100 43882548 ~ 43929432 (-) True AMCG00019772
AMCG00019771 mRNA downstream 307897 43874925 ~ 43877635 (-) True AMCG00019771
AMCG00019779 mRNA upstream 50334 44239490 ~ 44241946 (-) True AMCG00019779
AMCG00019783 mRNA upstream 149356 44338512 ~ 44340800 (-) True AMCG00019783
AMCG00019782 mRNA upstream 177745 44366901 ~ 44383650 (-) True AMCG00019782
AMCG00019788 mRNA upstream 328695 44517851 ~ 44542980 (-) True AMCG00019788
AMCG00019789 mRNA upstream 366025 44555181 ~ 44557413 (-) True AMCG00019789
TU46276 other downstream 529088 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 824626 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 1529139 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 1641008 42544116 ~ 42544524 (-) True G36817
TU44832 other downstream 9130088 35055019 ~ 35055444 (-) True G35867
TU46596 other upstream 707343 44896499 ~ 44910150 (-) False AMCG00019799
TU46822 other upstream 2176182 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 3703047 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 4333512 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 6521592 50710748 ~ 50712143 (-) True AMCG00019866

Expression Profile