RNA id: AMCG00019805


Basic Information

Item Value
RNA id AMCG00019805
length 1173
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00019805
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45992072 ~ 46001203 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTTTTCCTTTGCTGAGTGGAATGTTGCTGCTCTTCTCTGGGATTTTGGTAGGGAGCTCCCCCACCCCTGGCTCCCCAGATGGGCACATGTTGGTCACTGACTGCCCATCTTGTGCCCTTTCAAGGCTGCAAAAGGATATGCCAACAAGCTCCCTACCTGATATGGTTGAGGCAGtcaagaaacacattttgagCATGCTGCACTTGAAGGAAAGACCTAATATCACCCATCCTGTTCCCAGGGCAGCCCTACTGAATGCCATCAAAAAACTGCACGTGGGTAAAGTTGGTGAGGATGGCAACGTGGAAATTGAGGATGAGGGTCACAGTCGTGCAGAGATGAGCGAGTTGGCAGAGCAAACTTCAGAAATCATCACTTTTGCTGAGGCAGGTGATTCTGCAGACTTGGTCCGCTTTCAGATCTCTAAAGAAGGCAGTGAACTTTCTCTGGTTGAGCAAGCCAATGTCTGGCTCTTTCTCAAGCTCTCCAAGACTAACAGGAGCCGAGCCAAAGTGACCATCAGGCTGTACCAGAAGAAACAGGGCACAGACGGAGCAGAGCTGCAGGTGGTTGTCTCTGAGAAGGCAGTGGACACAAGGCGGAGTGGCTGGCACACCTTTCCTGTGTCCGGAAGTGTCCAGGCACTGCTGGAGAAGAGCTACAACTCCATGGATCTGCGAATAGCCTGTGAGCAGTGCCAGGATGCAGGTGCCACGCCAATTCTAGTGGAGAAGGATGAACGTGAGCAGTCTCACCGACCCTTCCTAATGGTTGTGGTACGGCAATCAGAAGATCATCCCCACCGCCGGCGGAAGAGGGGCCTGGAGTGTGATGGCAAGATTAGAATTTGTTGCAAAAAGCAGTTCCACGTGAGCTTCAAAGACATTGGATGGAACGACTGGATAATAGCCCCATCGGGATATCATGCCAACTACTGTGAAGGCGACTGCCCAAATCACATTGCTGGCATCACTggctcttctctctccttccactcAACTGTTATTAACCACTACCGAATGCGGGGCTATAGCCCCTTTACAAACATTaaatcttgttgtgttcctaccAAACTAAGGGCAATGTCTATGTTGTACTATGACGAAGGGCAGAAAATTGTCAAAAAGGACATTCAGAACATGATTGTAGAGGAATGTGGGTGTTCTTAA

Function

GO: NA

KEGG:

id description
K04667 INHBA; inhibin beta A chain

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46780 lncRNA downstream 10914 45980733 ~ 45981158 (-) True G37456
TU46766 lncRNA downstream 169952 45808851 ~ 45822120 (-) True G37443
TU46760 lncRNA downstream 312983 45678890 ~ 45679089 (-) True G37437
TU46758 lncRNA downstream 343234 45648401 ~ 45648838 (-) True G37435
TU46757 lncRNA downstream 343972 45647557 ~ 45648100 (-) True G37434
TU46818 lncRNA upstream 353880 46355083 ~ 46355716 (-) True G37490
TU46823 lncRNA upstream 426747 46427950 ~ 46428949 (-) True G37493
TU46881 lncRNA upstream 636987 46638190 ~ 46672792 (-) True G37539
TU46894 lncRNA upstream 727739 46728942 ~ 46730170 (-) True G37551
TU46905 lncRNA upstream 789824 46791027 ~ 46791485 (-) True G37562
AMCG00019802 mRNA downstream 713054 45269326 ~ 45279018 (-) True AMCG00019802
AMCG00019800 mRNA downstream 958887 45019140 ~ 45033185 (-) True AMCG00019800
AMCG00019799 mRNA downstream 1084572 44896794 ~ 44907500 (-) False AMCG00019799
AMCG00019801 mRNA downstream 1139222 44852128 ~ 44852850 (-) True AMCG00019801
AMCG00019789 mRNA downstream 1434659 44555181 ~ 44557413 (-) True AMCG00019789
AMCG00019806 mRNA upstream 105080 46106283 ~ 46133174 (-) True AMCG00019806
AMCG00019808 mRNA upstream 500644 46501847 ~ 46510145 (-) True AMCG00019808
AMCG00019807 mRNA upstream 531486 46532689 ~ 46543036 (-) True AMCG00019807
AMCG00019809 mRNA upstream 545110 46546313 ~ 46590268 (-) True AMCG00019809
AMCG00019813 mRNA upstream 873731 46874934 ~ 46881287 (-) True AMCG00019813
TU46596 other downstream 1081922 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 2335628 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 2631166 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 3335679 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 3447548 42544116 ~ 42544524 (-) True G36817
TU46822 other upstream 364135 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 1891000 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 2521465 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 4709545 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 4962210 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile