RNA id: AMCG00019828


Basic Information

Item Value
RNA id AMCG00019828
length 324
RNA type mRNA
GC content 0.57
exon number 1
gene id AMCG00019828
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 47790564 ~ 47790887 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGGATCAAGTCCAGGAATGTTGGTAACGCCTCCGAGGAGAAGAGAGACAAAAAGACATTGGGCTTGACCGGGGACCTGGACCAAGGCAACCTGGGCTTGGGGGCTGGGGTGGATCGAGATGGGGCGCTGTTACTGGTGGGTCCCGGCAGAGACGATTTCAAGAGGGGATCTCAGGGAATAGGACTCTTGGCGAAGACCCCCCTCGGGTACACCAGACCCGTGAAACGGAATAACATCAGGTACCGGAGGATACAGAACTTGATTTACGACGCGCTGGAGAGACCAAGGGGATGGGCGCTCCTGTACCACGCGTTCGTGTGA

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005251 delayed rectifier potassium channel activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47039 lncRNA downstream 102048 47687034 ~ 47688516 (-) True G37681
TU47002 lncRNA downstream 489936 47300127 ~ 47300628 (-) True G37652
TU46971 lncRNA downstream 773401 47016837 ~ 47017163 (-) True G37622
TU46954 lncRNA downstream 880992 46835708 ~ 46909572 (-) True G37610
TU46952 lncRNA downstream 957804 46827783 ~ 46832760 (-) True G37608
TU47053 lncRNA upstream 60716 47851603 ~ 47852031 (-) True G37690
TU47086 lncRNA upstream 115172 47906059 ~ 47971592 (-) True G37716
TU47110 lncRNA upstream 308511 48099398 ~ 48099619 (-) True G37738
TU47206 lncRNA upstream 752756 48543643 ~ 48549181 (-) True G37815
TU47230 lncRNA upstream 887289 48678176 ~ 48688913 (-) True G37836
AMCG00019823 mRNA downstream 84680 47690365 ~ 47705884 (-) True AMCG00019823
AMCG00019822 mRNA downstream 122702 47661324 ~ 47667862 (-) True AMCG00019822
AMCG00019818 mRNA downstream 510077 47245538 ~ 47280487 (-) True AMCG00019818
AMCG00019819 mRNA downstream 553710 47193563 ~ 47236854 (-) True AMCG00019819
AMCG00019816 mRNA downstream 857135 46922098 ~ 46933429 (-) True AMCG00019816
AMCG00019826 mRNA upstream 12177 47803064 ~ 47878857 (-) True AMCG00019826
AMCG00019824 mRNA upstream 101341 47892228 ~ 47901933 (-) True AMCG00019824
AMCG00019827 mRNA upstream 118660 47909547 ~ 47922255 (-) True AMCG00019827
AMCG00019825 mRNA upstream 134909 47925796 ~ 47935253 (-) True AMCG00019825
AMCG00019829 mRNA upstream 386079 48176966 ~ 48184937 (-) True AMCG00019829
TU46822 other downstream 1397466 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 2880414 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 4134120 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 4429658 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 5134171 42644324 ~ 42656393 (-) True G36862
TU47064 other upstream 101316 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 731781 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 2919861 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 3172526 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile